Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2716 ATGGAGTCGTTGCAGAAGAAGGTTGTGTTTGACGGAGAAGCGGCGTCGATGATGATGAAGGAGCTGAGAGGGAGCTTCGGTTCTGGAAAGACTAGAAGCTACGAGTGGAGAGTGTCGCAGGTGAAGGCACTGCTGAAGATGGTGACTGACAACGAGAAACAGATCATCGATGCTCTTCTCTCCGACCTCGCCAAGCCACCGCTCGAAACCGTCGTCTACGAGATTGGAATGTTTAAAAACTCATGTGAAGTCATATTGAAGGAATTGAAACAATGGATGAAGCCAGAGAAGGTCAAAACTTCAATATCAACATTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGGGTTGTGTTGGTCATTTCTGCATGGAACTATCCAATTTTGCTGTCTCTTGATCCAGTGGTTGGAGCCATTGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAGATTGCTCCAGCAACTTCATTACTGATGGCTAAACTGTTAGCAGAGTACATGGATAACTCATGTGTTAGAGTTGTTGAAGGAGCAGTTGATGAAACAAGTGCACTCTTGGATCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGAAGAGTGGGACGCATAGTCATGACTGCTGCTGCAAAACACCTTACACCTGTTGTTCTGGAGCTTGGAGGAAAATGTCCAGCAGTTGTTGATTCAGATGTCAATTTACAGGTAGCAGCTAGACGCTTAATTTCTGGCAAGTGGGGACTCAACAATGGACAAGCTTGTGTTTCTCCTGATTATGTTATTACAACAAAAGACTTTGCTCCCAAGTTGGTGGAATCTCTGAAGACTGAGTTGGAGAACTTCTTTGGAAAGAATCCGTTGGAATCAAAAGATATATCCAGAATTGTGAATCACAACCACTTTGCTCGCGTAGCGAAGCTCTTGGACGATGAGAAGGTTTCCGACAAGATTATTCATGGAGGTGAAAAGGATGAAAGCAAATTGCGGATTTCTCCCACTTTACTATTGGATGTTCCACATGATTCTCTGATCATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTGAATAAATTGGAAGAAAGTTTTGATCTGATCAATTCAAGAACAAAGCCTCTGGCTGCATATATATTTACAAACAACAAGAAGCTGAAGGAGCAGTTTGTGAAGAATGTTTCTGCAGGGGGCATGCTTGTCAATGACATTGCCTTACATCTTATTGTTCCCACGTTGCCATTTGGGGGAGTAGGAGACAGTGGAACAGGTTCATACCATGGAAGGTTCTCCTTTGAAGCATTTACTCACAAGAAAGCAGTTCTTTATCGTGGTTTTGGTGGAGACGCATCACTAAGGTATCCACCATACACAGAAACAAAACAGAGGGTGATGAAGGCACTCGTTAGTGGTGGTATTCTTAGCATCATTGGTGCTCTTTTGGGATGGTCCTCCAAGGCTTAA 1473 0.4365 MESLQKKVVFDGEAASMMMKELRGSFGSGKTRSYEWRVSQVKALLKMVTDNEKQIIDALLSDLAKPPLETVVYEIGMFKNSCEVILKELKQWMKPEKVKTSISTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPATSLLMAKLLAEYMDNSCVRVVEGAVDETSALLDQKWDKIFYTGNGRVGRIVMTAAAKHLTPVVLELGGKCPAVVDSDVNLQVAARRLISGKWGLNNGQACVSPDYVITTKDFAPKLVESLKTELENFFGKNPLESKDISRIVNHNHFARVAKLLDDEKVSDKIIHGGEKDESKLRISPTLLLDVPHDSLIMGEEIFGPLLPIITVNKLEESFDLINSRTKPLAAYIFTNNKKLKEQFVKNVSAGGMLVNDIALHLIVPTLPFGGVGDSGTGSYHGRFSFEAFTHKKAVLYRGFGGDASLRYPPYTETKQRVMKALVSGGILSIIGALLGWSSKA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2716 490 Pfam Aldehyde dehydrogenase family 30 444 IPR015590 GO:0016491
Amo17g2716 490 PANTHER ALDEHYDE DEHYDROGENASE 3 487 IPR012394 GO:0006081
Amo17g2716 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Amo17g2716 490 PIRSF ALDH 3 480 IPR012394 GO:0006081
Amo17g2716 490 SUPERFAMILY ALDH-like 20 451 IPR016161 GO:0016491
Amo17g2716 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Amo17g2716 490 PANTHER ALDEHYDE DEHYDROGENASE 3 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2716 Amo-Chr17 127910619 127916314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2716 10 487 Aldehyde Dehydrogenase Gene Family AT4G34240 64.854 0.0 652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0616 08 11019252 11024933 Amo17g2716 17 127910619 127916314 hybridization