LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo17g2714	ATGGCAGAGCGTGTGTTCCTCACTCATCCTTCGCTCACTTTACCATCCCAACCGTCTCCAACAACCAGAATGGCCTCCACCGCCACAGCCGCCATCGCTGCCTCACGCATTATTCCCTCCGCCACCGCACTCTCCTCTTCATCTTACCGCTCCTTCTTCTCCTCCTCTTCAACTTCTCGTTCCTCGCTCAAATGCCTCCACCTTCACTCCTCTTCTCGTTTCTCTCACCTCTTCGTCAATCAGCGAAGAGCTGAGGTTCGTGTTTCGAGTGGAGGCTATGCAACGGTTTCTTCTCCAAAGTCGTTGGCGTCTGATCCTGACCAGCTGAAGAGTGCTCGAGAAGATATCAAGGAGCTTCTCAGGACAAAGTTCTGCCATCCGATTCTGATTCGTTTGGGATGGCATGATGCTGGTACCTACAATAAGAATATTGAGGAATGGCCACAGAGAGGTGGTGCTAATGGTAGTTTAAGATTTGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTCGTGAATGCATTGAAGCTTATTCAGCCAATCAAAGACAAATATGCTCGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCTGTTGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTCTCATCACCTGAACAATGTCCTGAAGAAGGCAGACTTCCAGATGCTGGTCCTCCCTCACCGGCTGATCATTTGCGTCAAGTTTTCTACAGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGAAGGTCCAGACCTGAACGAAGTGGCTGGGGCAAGCCTGAGACTAAATATACAAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTACAATGGTTGAAGTTTGATAACTCATACTTCAAGGACATCAAGGAAAAAAAGGATGAAGATTTATTGGTATTGCCAACAGATGCTGTTCTTTTTGAGGATCCATCCTTCAAGGTTTATGCTGAGAAGTATGCTGAGGATCAGGTAGCATTCTTCAACGATTATGCTGAAGCCCATGCCAAGCTAAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGCATAGTATTAGATCCTTCTCCAAAGCCACAAGCAGAGAAGTTTGAAGCAGCAAAGTACTCAACTGGAAAGAGAGAGCTATCTGATGCTATGAAGCAGAAGATTCGATCCGAGTATGAGGCAATTGGTGGAAGCCCAGATAAGCCCCTACAGTCAAACTATTTTCTTAATATCATGATTATCATTGCTGTTTTGGCACTTTTGACATCACTGCTTGGAAACTAG	1335	0.4637	MAERVFLTHPSLTLPSQPSPTTRMASTATAAIAASRIIPSATALSSSSYRSFFSSSSTSRSSLKCLHLHSSSRFSHLFVNQRRAEVRVSSGGYATVSSPKSLASDPDQLKSAREDIKELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLIQPIKDKYARVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSSPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQVAFFNDYAEAHAKLSNLGAKFDPPEGIVLDPSPKPQAEKFEAAKYSTGKRELSDAMKQKIRSEYEAIGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN*	445

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo17g2714	444	MobiDBLite	consensus disorder prediction	10	25	-	-
Amo17g2714	444	SUPERFAMILY	Heme-dependent peroxidases	106	365	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	MobiDBLite	consensus disorder prediction	1	25	-	-
Amo17g2714	444	PANTHER	L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED	23	380	-	-
Amo17g2714	444	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	396	444	IPR044831	GO:0004601\|GO:0034599
Amo17g2714	444	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	23	380	IPR044831	GO:0004601\|GO:0034599
Amo17g2714	444	ProSiteProfiles	Plant heme peroxidase family profile.	129	413	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	ProSitePatterns	Peroxidases proximal heme-ligand signature.	256	266	IPR019793	-
Amo17g2714	444	PRINTS	Plant ascorbate peroxidase signature	126	141	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Plant ascorbate peroxidase signature	206	218	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Plant ascorbate peroxidase signature	105	125	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Plant ascorbate peroxidase signature	187	205	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	Gene3D	Peroxidase, domain 2	234	357	-	-
Amo17g2714	444	PRINTS	Haem peroxidase superfamily signature	296	311	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Haem peroxidase superfamily signature	126	140	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Haem peroxidase superfamily signature	256	271	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Haem peroxidase superfamily signature	206	218	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	PRINTS	Haem peroxidase superfamily signature	188	205	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	MobiDBLite	consensus disorder prediction	264	291	-	-
Amo17g2714	444	Pfam	Peroxidase	113	344	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Amo17g2714	444	MobiDBLite	consensus disorder prediction	219	240	-	-
Amo17g2714	444	PANTHER	L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED	396	444	-	-
Amo17g2714	444	CDD	ascorbate_peroxidase	101	367	-	-
Amo17g2714	444	Gene3D	-	112	365	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo17g2714	Amo-Chr17	127883903	127889850	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo17g2714	129	362	Peroxidase	AT4G36430	28.571	2.23e-18	84.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo17g2714	K00434		-	zju:107421087	658.677