Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2669 ATGCAGTTATATCATCATCCATTTGATTTAGATAGTCTGAAGGTTAGACTTGCATTGGAAGAGAAAGGCGTCGATTATACGTCTCACCATGTCAATCCGATAACTGGCAAGAACTTGGATTCCTCATTCTTCAAGATGAATCCGAGRGGAAGACTACCTGTTTTCCAAAATGGATCTCACATCATATACAAGACTATAGATATAATACAGTACATAGAGAGAATTGCTGTGGTCTCGGCAGGGTCTGAGAATATCAGTACCAGTGGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAAGTTCTTTTCACTTTCTCATATACCAGASAAATACCGCATTTACGTCTCCAAATTCATAAGGCGTGTTGTGATTGCCCGTATGTCCGAATCCCCTGAATTAGCAGGCGCTTACCATCGGAAGTTAAGAGAAGCCTATCAAACTGAAGAAAAAATGAAAGACCCAGATGTTGCAAGGAGGAGCGAGGAGCACTTGGTTAGACTGCTTGACGAAGTAGAGCGGCAGCTAGGCGAAACACCSTACTTAGCTGGTCAAGACTTCACCATGGCCGATGTGGTGCTTATCCCGGTGCTGGCTCGCTTAGTGCTCTTGGATTTAGAGAAAGTGTACATAACCAATAGGCCAAACATCGCCGAATACTGGGTTTTGGTTCAACAGAGGCCTAGTTATAAAAAGGTGATTGGTAAGCATTTTGSTGGTTGGAGAAAACACAAAACATTAATAAAAACATGGTGCTTTGTTCATATTAGAAGTTTGCTGAAGAGATACTAG 804 0.4204 MQLYHHPFDLDSLKVRLALEEKGVDYTSHHVNPITGKNLDSSFFKMNPRGRLPVFQNGSHIIYKTIDIIQYIERIAVVSAGSENISTSGREVIEWMQKIQEWDPKFFSLSHIPXKYRIYVSKFIRRVVIARMSESPELAGAYHRKLREAYQTEEKMKDPDVARRSEEHLVRLLDEVERQLGETPYLAGQDFTMADVVLIPVLARLVLLDLEKVYITNRPNIAEYWVLVQQRPSYKKVIGKHFXGWRKHKTLIKTWCFVHIRSLLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2669 267 SUPERFAMILY GST C-terminal domain-like 143 241 IPR036282 -
Amo17g2669 267 CDD GST_N_family 1 73 - -
Amo17g2669 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Amo17g2669 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Amo17g2669 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Amo17g2669 267 Gene3D - 130 238 - -
Amo17g2669 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 251 IPR010987 -
Amo17g2669 267 Gene3D Glutaredoxin 1 75 - -
Amo17g2669 267 CDD GST_C_family 147 225 - -
Amo17g2669 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Amo17g2669 267 SFLD Main (cytGST) 1 231 - -
Amo17g2669 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Amo17g2669 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2669 Amo-Chr17 126946180 126948747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2669 1 267 Glutathione S-transferase Gene Family AT1G77290 68.539 1.21e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2669 K22077 - gmx:100792543 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2669 17 126946180 126948747 Amo17g2669 17 126946180 126948747 ECH
Amo08g0686 08 12120764 12123233 Amo17g2669 17 126946180 126948747 hybridization