Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2645 ATGGACCATAGGGAGGGACCTCTATATATCTTGATTTCTATATGCATATTACAGAGAGTAGAAAAAACATACATGGGTGTGGAGGCGTACACATCAAAGCTAAAACCTCCGCTGCTGCTGCTTCTTGTTGTTGCAGCAGCACATGAAGCGGCGGTTATCCAAGTGGGCCCCAGAAACTGCAAACGCACATGCGGCTCCGTGAGCATTCCGTTCCCGTTTGGGACCACCAGGGAGTGCTCCCTCGCCCCCGAATTCCTCATCAACTGCACCCACCATGGCCCTTACTTGCCTTCCGCCTACTTATTGGAAGACAACGACTATGACTTACAAGTGCTGAACATATCTGTGGACGACGCCGAACTCCTTGTTTCGTTGCCGGTAGCCAGTGATTGCTACTACAACGACACCACAAGCAAGAAACAGGACAAAATCTTCAATAATGAAACCGACTGGCAGTTTAATTTTGGAAATTATAGCCTCTCATGGAGCCGAAACGTGTTCACAACCGTTGGTTGTGACACACTGGGATTAGTGGTGACAGGGGATTTTTACGGCGATGGTAAACCCTATGTTAAGACATGCTTTTCTTACTGCGAGGATCGCGCTGATGCAATGACTGGGTCCTGTAATGGCACTGGTTGTTGCCATATTGACATACCCAAGGCCGAGGTCAAAGAAGAAGTGTTAACGGCAATCTCTTATGGTTTTGAAAACTCGCTACTCAACAACAGTGATAAGATTGAGTACAGCCCTTGTGGTTATGCGTTTGTGGCGGAGAAAGGACGCTACGACTTTGTGTCCGCAGATCTGAATAACACGAAGTTGAACAATACTAAGTTCCCGGTGGTGCTGGATTGGAGTGTTGGGAACCAGACCTGTGAAGAAGCCAAGAAGAAGAATTCCAGCTATGCATGTAAAGGCCCAAACACCACGTGTCAGCCTTCAGAGAAGCGTCCTGGTTACCTATGCAAATGCCGTCCTGGTTTTCAGGGTAACCCTTATCACCAGAATGGTTGCCCACAAGATATTAACGAGTGCGATGGACCCAATGATTGCGTCAAAGGAGCAATATGCCTCAACTACCCACCAGGGAACTACACGTGTAAGTGTCCAAAGGGACTCAAAGGAGATGGGAGAAACAATGGAACAAAATGCCAAACCCGAAAGCCCAAATCCGACACACAGATCATGCTTATAATTGCATTGAGTATTAGTGTGTGTGTAATATCCCTACTCATGGCGTGCTCTTACATTTATTGGGCTTTGAAAAAGAGAAAGCTGATTAAAATGAAAGAACAATTGTTTCAACAAAATGGTGGGCTATTGTTACAACAACAAATTGCAACACATCATCAAGGATCAACTCAAACAGCTAAAGTCTTCAGTGTGGAAGAGTTAAAGAAAGCAACCAACAACTTCGATGAATGCAATGTCCTTGGCCAAGGTGGTCAAGGAACCGTTTACAAAGGACTCTTATTGGACAACAGAGTTGTAGCAATCAAAATGTCAAAAATCAGTGACATTAGTCAAGTTGAGCATTTCATCAATGAAGTTGTTGTACTCTCCCAAATCAACCATAGAAATGTGGTTAAGCTCTTGGGTTGTTGCTTAGAAACAAAGGTTCCCCTGCTTGTTTATGAGTTCGTTCCAAATGGTACTATCCATGATCATCTTCATGGTTATACACAAATATCATCAGAGCTTACATGGAAAGTAAGATTGAGAATAGCGGCAGAAACTGCTGAAGCCTTGGCTTACTTGCATTTTGCAACTTCCATTCCCATCATACACAGAGATGTGAAAACCAGTAACATACTCCTTGATCGTGATCTAACCGCAAAGGTTTCCGATTTCGGAGCTTCAAGGATTGTTCCTCTTGATAAAACACAGATAACCACATTGGTGCAAGGAACATTAGGGTATCTTGACCCTGAATACTTTCACACAAGCAAGTTGACTGAGAAAAGCGATGTGTATAGTTTCGGAGTCGTGCTGGCAGAGTTACTTACGGCGAGGAAAGCACTCGCTTTTGATGTGCCTGAAGATGAGAAGAACCTTGCAAAACACTTTGTGGTTTCAATGGAAGAGGGACGTTTACTTGAAATTGTGGAGAAGCACATTGTAGAAGAGGCAAAAGAGGAGGCACTTGTTGAATTTGGCAATATTGCATTGAGATGCTTGAAGTTGAAGGGAGAGGAAAGACCTTCAATGAAACAAGTGGCGATGGAACTTGAGAGACTTAGAGTTGAGGAATGCGGCAACAAAGTGATTATTGCATCCTCGTCTGCCTTTCATGTTGAAGATGGGGGTGGTGTAAGTGATATTAGTATTGGGGTTGATGCCTTAAACCTAGATTCCATGTCATTGGGTAGTGGAAGATGA 2382 0.4408 MDHREGPLYILISICILQRVEKTYMGVEAYTSKLKPPLLLLLVVAAAHEAAVIQVGPRNCKRTCGSVSIPFPFGTTRECSLAPEFLINCTHHGPYLPSAYLLEDNDYDLQVLNISVDDAELLVSLPVASDCYYNDTTSKKQDKIFNNETDWQFNFGNYSLSWSRNVFTTVGCDTLGLVVTGDFYGDGKPYVKTCFSYCEDRADAMTGSCNGTGCCHIDIPKAEVKEEVLTAISYGFENSLLNNSDKIEYSPCGYAFVAEKGRYDFVSADLNNTKLNNTKFPVVLDWSVGNQTCEEAKKKNSSYACKGPNTTCQPSEKRPGYLCKCRPGFQGNPYHQNGCPQDINECDGPNDCVKGAICLNYPPGNYTCKCPKGLKGDGRNNGTKCQTRKPKSDTQIMLIIALSISVCVISLLMACSYIYWALKKRKLIKMKEQLFQQNGGLLLQQQIATHHQGSTQTAKVFSVEELKKATNNFDECNVLGQGGQGTVYKGLLLDNRVVAIKMSKISDISQVEHFINEVVVLSQINHRNVVKLLGCCLETKVPLLVYEFVPNGTIHDHLHGYTQISSELTWKVRLRIAAETAEALAYLHFATSIPIIHRDVKTSNILLDRDLTAKVSDFGASRIVPLDKTQITTLVQGTLGYLDPEYFHTSKLTEKSDVYSFGVVLAELLTARKALAFDVPEDEKNLAKHFVVSMEEGRLLEIVEKHIVEEAKEEALVEFGNIALRCLKLKGEERPSMKQVAMELERLRVEECGNKVIIASSSAFHVEDGGGVSDISIGVDALNLDSMSLGSGR* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2645 793 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 33 749 - -
Amo17g2645 793 CDD EGF_CA 342 377 - -
Amo17g2645 793 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 749 IPR045274 GO:0007166
Amo17g2645 793 ProSiteProfiles EGF-like domain profile. 342 386 IPR000742 -
Amo17g2645 793 Gene3D Laminin 289 385 - -
Amo17g2645 793 ProSiteProfiles Protein kinase domain profile. 473 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2645 793 SMART egf_5 292 340 IPR000742 -
Amo17g2645 793 SMART egf_5 345 386 IPR000742 -
Amo17g2645 793 Gene3D Phosphorylase Kinase; domain 1 443 548 - -
Amo17g2645 793 Gene3D Transferase(Phosphotransferase) domain 1 549 762 - -
Amo17g2645 793 SMART serkin_6 473 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2645 793 SUPERFAMILY Protein kinase-like (PK-like) 456 745 IPR011009 -
Amo17g2645 793 SMART egfca_6 342 386 IPR001881 GO:0005509
Amo17g2645 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Amo17g2645 793 Pfam Wall-associated receptor kinase galacturonan-binding 60 121 IPR025287 GO:0030247
Amo17g2645 793 CDD STKc_IRAK 479 747 - -
Amo17g2645 793 SUPERFAMILY EGF/Laminin 341 386 - -
Amo17g2645 793 Pfam Protein tyrosine and serine/threonine kinase 477 744 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2645 Amo-Chr17 125941462 125946069 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2645 59 793 Receptor kinase-like Gene Family AT1G21250 44.914 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo17g2645 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2645 - - ahf:112763858 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2645 17 125941462 125946069 Amo17g2645 17 125941462 125946069 ECH