Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2643 ATGAAGGAAAAGAGGCTAAATAAACTTAAGGAACAATTTTTTCAACAAAATGGTGGCTTCATCCTACAACAAAAGATTTCAAGACATAGAGGGTCAAAAGAAACAGCTAAACTCTTCACCGTGGAAGAATTAAAGACAGCCACCAACAACTTTGACGAAAGCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATARAGGATTACTATCAGACAATAGAACCGTAGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAATTGAACAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAACGTGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACTAGCCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACGGCAAAGAAGGCGCTCTCTTTCGCCGTGTCGCCGGAGGTTAGAAACCTTGCCGTATACTTTGTTTCTTCAATGGATGAAGGCTGTTTACTTCAGATTGTGGACGAACACATTATAAATGAAGCAAACGTTGAGCATCTTATGGAATTTGCCAATGTTGCTAAACAGTGTTTGAGAGTTAAGAGGGAAGAAAGGCCTAGCATGAAAGAAGTTGCATTGCAACTTGAGGGGCTTAGAGGAGTAGTTGGAGAGAAACACCGATTGGAAGAAACTAAAAGCTCGTTGAAAGCATCATCGTCTTCAATCTTGGATGTTGAAAGTTCTAAGTTTATTGATAGCTTAAGTCAGGTTCCTATGTCACTGGCTGGTGGAAGATGA 798 0.4048 MKEKRLNKLKEQFFQQNGGFILQQKISRHRGSKETAKLFTVEELKTATNNFDESKILGKGGQGTVYXGLLSDNRTVAIKRSKISGSTQIEQFINEVVLLSQINHRNVGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTAKKALSFAVSPEVRNLAVYFVSSMDEGCLLQIVDEHIINEANVEHLMEFANVAKQCLRVKREERPSMKEVALQLEGLRGVVGEKHRLEETKSSLKASSSSILDVESSKFIDSLSQVPMSLAGGR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2643 265 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2643 265 Pfam Protein tyrosine and serine/threonine kinase 112 214 IPR001245 GO:0004672|GO:0006468
Amo17g2643 265 SUPERFAMILY Protein kinase-like (PK-like) 47 217 IPR011009 -
Amo17g2643 265 Gene3D Transferase(Phosphotransferase) domain 1 110 249 - -
Amo17g2643 265 Gene3D Phosphorylase Kinase; domain 1 25 109 - -
Amo17g2643 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 108 240 IPR045274 GO:0007166
Amo17g2643 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 107 IPR045274 GO:0007166
Amo17g2643 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 108 240 - -
Amo17g2643 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2643 Amo-Chr17 125893210 125898373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2643 108 230 Receptor kinase-like Gene Family AT1G21250 49.593 1.83e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo17g2643 PK_Tyr_Ser-Thr 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2643 - - aip:107607783 296.975