Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2637 ATGGCTGAGCATTTATCAAAGAACCTCCTCTTCCTCATTTTCTTTTTAGCAGCTCATGCTAATGATGCAGCAACTCAACCCGCCAAACACTGCCTAACCAAATGCGGCCACGTCAGCATTCCCTTCCCGTTTGGCACCACAAAGGATTGCTCCCTTGACACCAATTTTCTCATAAATTGCACCAACAATGTCCCATACTTATTGCCCTTATCAAACAACACCGCCCTAATTCTCCTAAACATATCCCTCGTCGATTCCGATCTCCGCGTTTCGTCGCCGGTAGCTAGCGATTGCTATAGCATCGACGACCAGGGCAAAATCAGCAACATTCAAACCGATCAGTTTCTTTTCTCGGGAAACTTTAGCATCTCATGGACCCGAAACACGTTCACCGCAATTGGTTGTAACACACTTGGAGTAGTTGTGGCGTTTACACTGGAAGATTCGAGACATTATCCCGCCACATGCTTTTCCTACTGCGAGAAACTTGAACATGCGAGCAATGGCTCCTGCACCGGCAGCGGTTGTTGCCGTATTAATATTCCCCGCGCCGCAGAAGGGCGGTTATTAACGTTGATCGGTTATTATTTTGAGAACAATGACTTTAACAACAGCCAAGTGAGTGACTTCAACCCATGCAGTTATGCATTCTTGGTGGAAGAAGATGGCTATGAATTTGAGACGACACACCTGAAGAAGCTGGAGAGTACTGAGTTTCCGGTGGTTCTGGATTGGAGTATAGGGGACCAAACGTGTATTGAAGCTATGAAGAATCCTTCCAGCTTTGCGTGTAAGGCAGAGAACAGCACGTGTCACGATTCTGATAAGCGTCCTGATATTGATGAATGCGCTGGACCCAATGATTGCTTCCATAAAGCAAAATGCGAGAACACACCTGGCAGCTACAACTGTTTGTGTCCAGAAGGATTTGAAGGAGACGGGAAAAACAATGGAACTCGATGTACTAGTCCCAAGTCCAGTTATAGGACAAAGACCACTTTGATTTATTCATTATGTTTGGGCATCAGCATAGGCATCTTAGCGTTAGTTGTGGCAAGCTTTTATGTGCATTGGAAAGTGAACAAAAGAAAGCTCATCAAACTTAAAGAACAGTATTTTCAACAAAATGGCGGTTTCTTGTTGCAAGAACATATATCCAAACATAGAAACTCAGGCCAAATAGCCAAAGTCTTCACTATTGAGGAACTAAGAAAAGCAACCAACAACTTTGATGCATGCAAAATCCTAGGCCAAGGGGGCCAAGGAACAGTTTACAAAGGAGTATTATCAGACAATAAAACCGTAGCAATAAAGAAGTCCAAAATTAGTGGCCCAAGCCAAATTAATAAGGACTTCATCAATGAGTTAGTTGTACTGTCACAAATCAACCATAGGAATGTTGTTAAGCTCTTGGGTTGTTGTTTAGAAACAGAAATTCCCTTGCTTGTTTACGAATTCATTCCCAATGGTACTGTTTTTGAGCATCTTCATGGTCATGGAACATTTCTAAGACTTACATGGAAAACAAGATTGAGAATAGCTGCTGAAACTGCTGGGGCTTTAGCTTACTTGCATTTGGATACTTGTATCCCCATAATTCATAGAGATGTGAAAACTAGCAATATTCTACTTGATCATGATCTCACTGCAAAGGTTTCTGATTTCGGAGCTTCAAGGATTGTTCCTCAAGATAAAATTGAGTTAGCTACTTTGGTGCAAGGAACATGTGGGTATCTTGATCCAGAAACCTTCCTCACAAGCCAATTAACGGATAAGAGTGATGTTTATAGTTTCGGAGTTGTTCTTGCGGAACTATTTACAGGAAGAAAAGCTCTCTCTTTTGACATGCCGGATGCTGAGAAAAACCTTGCAATGTTCTTTGTAACTTCAATGGAAGAGAATCGTTTGCTTGATATTGTAGACAAGAGCATAATAAATGAAGCAAAGGTTGAGCATGTATATGAATTTGCCAAGATTGCAAAACAATGTTTAAGCTCGAAAGGAGAAGCAAGGCCTACAATGAAAGCAGTGGCAATGGAACTTCAGGGGATTAGAGCTGAGGAAAAACATATATGTCTAACATAA 2085 0.4177 MAEHLSKNLLFLIFFLAAHANDAATQPAKHCLTKCGHVSIPFPFGTTKDCSLDTNFLINCTNNVPYLLPLSNNTALILLNISLVDSDLRVSSPVASDCYSIDDQGKISNIQTDQFLFSGNFSISWTRNTFTAIGCNTLGVVVAFTLEDSRHYPATCFSYCEKLEHASNGSCTGSGCCRINIPRAAEGRLLTLIGYYFENNDFNNSQVSDFNPCSYAFLVEEDGYEFETTHLKKLESTEFPVVLDWSIGDQTCIEAMKNPSSFACKAENSTCHDSDKRPDIDECAGPNDCFHKAKCENTPGSYNCLCPEGFEGDGKNNGTRCTSPKSSYRTKTTLIYSLCLGISIGILALVVASFYVHWKVNKRKLIKLKEQYFQQNGGFLLQEHISKHRNSGQIAKVFTIEELRKATNNFDACKILGQGGQGTVYKGVLSDNKTVAIKKSKISGPSQINKDFINELVVLSQINHRNVVKLLGCCLETEIPLLVYEFIPNGTVFEHLHGHGTFLRLTWKTRLRIAAETAGALAYLHLDTCIPIIHRDVKTSNILLDHDLTAKVSDFGASRIVPQDKIELATLVQGTCGYLDPETFLTSQLTDKSDVYSFGVVLAELFTGRKALSFDMPDAEKNLAMFFVTSMEENRLLDIVDKSIINEAKVEHVYEFAKIAKQCLSSKGEARPTMKAVAMELQGIRAEEKHICLT* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2637 694 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 17 690 - -
Amo17g2637 694 ProSiteProfiles Protein kinase domain profile. 410 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2637 694 CDD EGF_CA 279 313 - -
Amo17g2637 694 Pfam Protein tyrosine and serine/threonine kinase 413 681 IPR001245 GO:0004672|GO:0006468
Amo17g2637 694 Gene3D Phosphorylase Kinase; domain 1 377 486 - -
Amo17g2637 694 Gene3D Laminin 279 323 - -
Amo17g2637 694 SMART egf_5 282 322 IPR000742 -
Amo17g2637 694 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 295 306 IPR000152 -
Amo17g2637 694 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 690 IPR045274 GO:0007166
Amo17g2637 694 Gene3D Transferase(Phosphotransferase) domain 1 487 692 - -
Amo17g2637 694 ProSiteProfiles EGF-like domain profile. 279 322 IPR000742 -
Amo17g2637 694 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Amo17g2637 694 Pfam Calcium-binding EGF domain 279 321 IPR001881 GO:0005509
Amo17g2637 694 SUPERFAMILY EGF/Laminin 279 316 - -
Amo17g2637 694 ProSitePatterns Calcium-binding EGF-like domain signature. 279 304 IPR018097 GO:0005509
Amo17g2637 694 Pfam Wall-associated kinase 169 269 IPR013695 GO:0004674|GO:0016021
Amo17g2637 694 CDD STKc_IRAK 416 684 - -
Amo17g2637 694 SMART egfca_6 279 322 IPR001881 GO:0005509
Amo17g2637 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Amo17g2637 694 SUPERFAMILY Protein kinase-like (PK-like) 394 682 IPR011009 -
Amo17g2637 694 SMART serkin_6 410 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2637 Amo-Chr17 125786345 125789610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2637 9 687 Receptor kinase-like Gene Family AT1G21230 43.927 7.42e-180 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo17g2637 PK_Tyr_Ser-Thr 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2637 - - ahf:112765693 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0544 08 9938617 9943299 Amo17g2637 17 125786345 125789610 hybridization