Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2619 ATGTCTAAGGGAAGAGGCAGTGCATCTTTACTTATGGTTATGGCCACCTTGATCTCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAAAGGAAAAACCTTTAAAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAAGTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCTAAAGTGTTCAGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGAAAATTGCCGTCAATGCAGCTTGA 387 0.4496 MSKGRGSASLLMVMATLISLMCLLFLVKPSNAATYTVGGPGGWSFNTNSWPKGKTFKAGDVLVFNYDSSTHNVVAVDRSGYSSCRTPRGAKVFRSGKDQIKIARGANYFICNVPGHCESGMKIAVNAA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2619 128 PANTHER BASIC BLUE-LIKE PROTEIN 10 126 - -
Amo17g2619 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
Amo17g2619 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Amo17g2619 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Amo17g2619 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Amo17g2619 128 Gene3D - 33 127 IPR008972 -
Amo17g2619 128 PANTHER BLUE COPPER PROTEIN 10 126 IPR039391 GO:0009055
Amo17g2619 128 CDD Plantacyanin 33 127 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2619 Amo-Chr17 125584731 125585502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2619 1 127 Phytocyanin Superfamily AT1G17800 36.029 2.57e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2619 - - gmx:100788635 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2619 17 125584731 125585502 Amo17g2619 17 125584731 125585502 ECH