Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2615 ATGGGACCTCCAGGACCACCCACTCAAATTGGTAGTGCTCAGTCTGTGACGCCTTCTCTTTTGAGATCGAATTCTGGAATGTTAGGGGCTCAAGGGGGCCCCATGCCTTCGCAGACTTCTTTCCCTTCTCTTGTGTCGCCACGCACTCAGTTCAACAACATGAACATTCTAGGAAACATGTCTAATGTAACTTCCATGCTGAATCAATCTTTCCCCAACGGAGTTCCAAATCCTGGGATCTCGGGTCCTGGAAGTAGCCAGCGAGGAGTTGTTGATACTGGAGCCGAAACAGATCCGCTGTCAAGTGTTGGCAATGGAATGAGCTTCAGTAATTCCGCATCCTCGTTCGTACAGTCAAATATGGTGAATGCTGSTTCTTCTGTTCAAGGTCAAGGTCAACAATTTTCAAATCCATCTAYTAACCAGCTGTTGCCAGATCAGCAGCATTCACAACAGATGGAACCTCAGAATTTCCAACATGGTCAGCAGCCAATGCAGCAGTTCTCTGCTCCTCTGAATACGCAGCAGCAACAGCAGCAGCAGCATTTTCAATCAATGAGAGGAGGGGTAGGTGGTATGGGACCGGTAAAGTTGGAGCCGCAGGTAAGCAATGACCAACTTGGTCAGCAGCAACAGCAGCAAATACAATCGTTGAGGAATCTTGCTCCAGTGAAATTGGAACCACAGCAAATTCAATCAACTCGAACTCTAGCCCAAGTGAAAATGGAGCCCCAGCATTCTGATCAACCATTATTTTTGCATCACCAGCAACACCAGCAACAACAACAACAACAGCAGCAACAACAACTACAACAGCAGCAGCTCCTCCACATGTCAAGACAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCTTCTGCACCAGCAGAGGCTTTTGCAATTTCAACACCAGCAGCAGCAYCAACTCTTGAAAGCAATGCCTCAACAACGGCCTCAACTGCCACAGCAGTTTCAACAGCAGAATATGCCCATAAGGTCTCCTGTGAAACCAGGATATGAACCCGGAATGTGTGCTAGGCGGCTTACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTCTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTCTGGCACTGTGAAATATGTAATCGCAAACCTGGTCGTGGGTTCGAAGCAACTGTTGAGGTTCTTCCTAGGCTTTTCAAAATAAAGTATGAAAGCGGCACTTTGGAAGAGCTGCTTTATGTTGACATGCCCCGTGAATATCATAATTCATCTGGGCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAWCTTCGAATAGTTTTCTCCCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTAGGCGCCATGAAGAACTCATTCCTAGAAGATTGTTAATACCTCAGCTTGGAGCGGTTGCTCAAAAGTACCAGGCCTTTACTCAAAATGCTACACCAAATGTGTCGGCTCCAGAGTTGCAAAATAACTGCAATATGTTTGTTGCATCCGCCCGTCAATTGGCTAAAGCCTTGGAAGTTCCATTAGTAAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAGGACTTGATAGATTACAGCAGAGAAACAGGGACTGGACCCATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGATCATCTGGAATTCATAATCAAGGACAACAACATGAAGATAGATTACAGCAGCAACCGGAACAGCAACAGCAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTGCAAGCTGGTGCCATGCAAATCGCTTCCAGCAATGGTATGGTCAGTGTAAATAACACTGCCAACTCTGCATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCAATGAATTCTAGACAACAAAGTTCAATGAACAATTCAGGCAGTCCCTATGGAAGCAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCGAGCACTGTTCCACCGGCCCAGCCTAACTCATCACCTTTCCAATCACCTACACCATCTTCGTCCAATATTCCCCCACAAACATCTCACCCCACCACCTTAACGTCCGCCAATCACATAGGCGCAACAAACTCATCGGGTAACATGTCCTTGCAACATCAGCAATCACCTCTCTCTGGTGAGGCAGACCCGAGTGATGCTCAGAGCTCCGTACAGAAAATAATACARGAGATGATGATGTCCTCCCAGATGAATGGCACAGGTGGAATGGTAGGTGTTGGTTCTCTTGGGAATGACGTGAAGAACGTAAATGGTATTCTGCCGGTGAATACCAATACGGGGCTCAATGGTGGCAATGGCATGGTAAGCAATGGTGCGATGAACAGTAATTCCGGCGTTGGGATTGGTAGTTACGGCACAATGGGTATCGGTCAATCCGGTATGCCTAATGGAATGAGAGCTGCTATGGGAAATAATTCTGTCATGAATGGAAGAGGAGGAATGGCCTCAATCGCGAGGGATCAAGCCATGAACCATCAGCAGGATTTGTCAAATCAACTACTTAGCGGTCTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATAA 2763 0.4571 MGPPGPPTQIGSAQSVTPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSMLNQSFPNGVPNPGISGPGSSQRGVVDTGAETDPLSSVGNGMSFSNSASSFVQSNMVNAXSSVQGQGQQFSNPSXNQLLPDQQHSQQMEPQNFQHGQQPMQQFSAPLNTQQQQQQQHFQSMRGGVGGMGPVKLEPQVSNDQLGQQQQQQIQSLRNLAPVKLEPQQIQSTRTLAQVKMEPQHSDQPLFLHHQQHQQQQQQQQQQQLQQQQLLHMSRQSSQAAAAQMNLLHQQRLLQFQHQQQHQLLKAMPQQRPQLPQQFQQQNMPIRSPVKPGYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCLSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGXLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQLGAVAQKYQAFTQNATPNVSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGIHNQGQQHEDRLQQQPEQQQQMVAHNSNGDQNSVQAGAMQIASSNGMVSVNNTANSASASTTTSTIVGLLHQNSMNSRQQSSMNNSGSPYGSSSVQIPSPGSSSTVPPAQPNSSPFQSPTPSSSNIPPQTSHPTTLTSANHIGATNSSGNMSLQHQQSPLSGEADPSDAQSSVQKIIQEMMMSSQMNGTGGMVGVGSLGNDVKNVNGILPVNTNTGLNGGNGMVSNGAMNSNSGVGIGSYGTMGIGQSGMPNGMRAAMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKPSP* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2615 920 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 919 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 587 650 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 64 112 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 124 221 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 1 48 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 250 276 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 678 784 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 235 276 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 202 220 - -
Amo17g2615 920 Coils Coil 253 273 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 124 186 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 602 650 - -
Amo17g2615 920 MobiDBLite consensus disorder prediction 8 48 - -
Amo17g2615 920 PANTHER LIM DOMAIN-BINDING PROTEIN 1 919 IPR029005 -
Amo17g2615 920 Pfam LIM-domain binding protein 347 598 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2615 Amo-Chr17 125483514 125489620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2615 1 916 C2H2 Transcription Factor Family AT1G43850 60.336 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2615 - - gmx:100799771 1418.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2615 17 125483514 125489620 Amo17g2615 17 125483514 125489620 ECH
Amo08g0561 08 10295659 10303801 Amo17g2615 17 125483514 125489620 hybridization