Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2602 ATGGTTGGCACAAGCGCTGACACTGAGGTTGGTGTGCTTGTCTTAGCGCTCTTGAGAGAGCTTGAGATGGAGAGCGTGGCCTTGGTTGATGCTTGTGTCAAGGGATGTGTCAAGGTTTGTTGGTGTCATGGTGGTTTGTGGATGGGAGAGTGGCGCTCTCCAGCAAGCTTGCTGGAGAGCTTTGAAGAGAGCGTAGGTTTAGGCATAATGGGTGAAAGTGGCACTCCCAGCAAGCTTGCTGGAGAGCTTGGAGTGCTGAATAGTGTGGTGAGGTTGGTGTCAAGGTGTGGCAAGCTTAATCCTCAAATTGAAGAGCAGTTTGGTGGTGAGAGATTGCTGGCTTGCATTGCTTCTCGACCTGATCAATGTGGCAGGGCTGACAGGTGTGCTTTACCTGCATGTGATATCAGCTTAGACAGAAATCGGACTGTACGTGCGAGTGGAGAGAGGCTTATCGGACGGTCCGACTTGCTCACAACAACACGAACTATGAGATTTGTTGACTGGCTTCCACGTGTCGCAGCTCCCTTGTTCCCCAGGACGCATCCAGAGACACATACCTTTCACCTTCCGGTTGGTGAATGTGCTGTGACGCTGGAAGATGTGACCTTAATTCTCGGTCTTTCGACGGATGATCTTCCAGTCACAGGGATGACTATTAGTAGTTTTGAAGCCTTAGAGGCGGAGTGTCTGCACCAATTTGGGGTTGCTCTGAGAAAGTCAGACTGTAGAGGAAGCTGCATAAAACTGACATGGCTTCGTGATCTGAAAGAACGTTTGCAGTTGATTGATGAAAACAGTATACAGAGGGCATCTCGTTATGACTGTAAGGAGATCGATGGTCCACTAACACTCTTGCTCGTTTGGACTTTTATGCGAATGCCGTATCTAGCACCGGTTCTGAGGGAACCCCACAGTTTTTCGCTTGCAAATAGGTGGCGTAACTGGGAGCGTGGAGACCGACGCTTTAGGTATCTTACACTTGCTCACTTTAGGAAGGCATTCGATGATCTTCAGGAAGGCCATTTTGTGTGGGTTGCTTATGCTGTGGATCGCGTGGATCCAGATATAATTCCTCCTGACATCTACATGCATTCGGTTGTGTGGAGTGCTACAATGCCATTGGTGTCTTTTGAATGCATTGAGTGGCATGCTATCGATCGGTGTAGGCAACAGTTCGATTTTGTTCAGGGAGTTCCTCATCAGGAATGGAATCTAGACAAGGCACACAATGAAGTTCTAACTGGGCCTAAGAATCTTAACTGGGCCACAACCACGAGTCATTCATTTTGGGTTATGCAATGGACAAACAGGTATAATCACGTTCTTACTGAGCTTCCCATGCCTCCACAGCATCCCTTAGATATTTACATGCACTGGTAG 1383 0.483 MVGTSADTEVGVLVLALLRELEMESVALVDACVKGCVKVCWCHGGLWMGEWRSPASLLESFEESVGLGIMGESGTPSKLAGELGVLNSVVRLVSRCGKLNPQIEEQFGGERLLACIASRPDQCGRADRCALPACDISLDRNRTVRASGERLIGRSDLLTTTRTMRFVDWLPRVAAPLFPRTHPETHTFHLPVGECAVTLEDVTLILGLSTDDLPVTGMTISSFEALEAECLHQFGVALRKSDCRGSCIKLTWLRDLKERLQLIDENSIQRASRYDCKEIDGPLTLLLVWTFMRMPYLAPVLREPHSFSLANRWRNWERGDRRFRYLTLAHFRKAFDDLQEGHFVWVAYAVDRVDPDIIPPDIYMHSVVWSATMPLVSFECIEWHAIDRCRQQFDFVQGVPHQEWNLDKAHNEVLTGPKNLNWATTTSHSFWVMQWTNRYNHVLTELPMPPQHPLDIYMHW* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2602 460 PANTHER PROTEIN MAIN-LIKE 2 270 448 IPR044824 GO:0010073|GO:0048507
Amo17g2602 460 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 177 255 - -
Amo17g2602 460 Pfam Plant mobile domain 269 460 IPR019557 -
Amo17g2602 460 Pfam Plant mobile domain 182 258 IPR019557 -
Amo17g2602 460 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 270 448 - -
Amo17g2602 460 PANTHER PROTEIN MAIN-LIKE 2 177 255 IPR044824 GO:0010073|GO:0048507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2602 Amo-Chr17 125230935 125237572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2602 99 138 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 55.000 3.67e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2602 - - aip:110266789 412.149