Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2595 ATGATTTCCACTGCAGTTTCTCCTGCCATTGCTATCGCAGTTTCCGCCATCGTTGCTGCTGTAGTTGCGGCATCGAAAGCTTCTGAATCGAGCCACTATTTCAGATCTGTTTTCTCCTTTGAGTTGCCGCTGTTGTTGTTAATGGGAAATGTCTTTGCAGGATGGGGAACGGACGAAGGACTTATAATAAAAATCCTGTCTCATAGAAATTTAGCTCAGCGCGAGTTGATTTGTGCAGCTTATGCTTCAGCTCATGGAGAGGATCTTCTTACATCGTTAGACAAAGAACTTTCAACATCTAGTAGTGGTGAATATGAAACTTCAGGATCCACAACTGCTAGTGCTTTTGGCCTTCCAGAAATTATGGCAGCAAAATCGATGGAATTCTCTTATCAAGAACTAGCCAAGGCTACAAATAACTTTAGCTCTGATAACAAAATTGGTCAGAAAGCAGCAATTAAGAAGATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGAAGGTCTTAACACATGTTTATCACTTGAATCTGTTTCTATGGCATTCAGTGAATCTCAACTTGACTCTAATCAATTTAGGTGCATTTGATTGGATATTGCGTCGAGGGATCTCTTTCCTTGTGTATGAATACATTGAAAATGGAAACTTAGGCCAATATTTGCATGGTACAGTACCAAATTCAACATTTAATCTTTGTTATCATACTAGTGACAATGTTGGTAATATGATTCCAAGGAGAGAACCTTTAGCATGGTCAACAAGGGTGCAAATTGCTCTGGATTCACCAAGAGGACTTGAATATATACATGAACACACTATTCCTGTTTATATCCACCGTGATGTGAAACCTGCTAACATATTAATATATAAAGACTTCCATGGAAAGGTGAAAGCTGCTATTTGGCAAGGCAGAAGAAGTATGCCGGTTAATGGATATGAGGCAAGGGCTATCATGGCTCTTTTGCAATGTGCTGAGACGTTGGAACAACATTGGTGGTCCTCATTGGACTTGTCTTTGGTTGCCACCACTAGTTCCTCAAAGCTTGGAAGAGAGAGTTTCATAGATCTTAACCTCCCTGCCCCAGCCGAACAAGATGATGCAAGCCAATTTGAGGATTCCGTGGTTTCGGATGCAGAATTTGTGAATCCGGTGAAG 1161 0.4074 MISTAVSPAIAIAVSAIVAAVVAASKASESSHYFRSVFSFELPLLLLMGNVFAGWGTDEGLIIKILSHRNLAQRELICAAYASAHGEDLLTSLDKELSTSSSGEYETSGSTTASAFGLPEIMAAKSMEFSYQELAKATNNFSSDNKIGQKAAIKKMDVQASTEFLSELKVLTHVYHLNLFLWHSVNLNLTLINLGAFDWILRRGISFLVYEYIENGNLGQYLHGTVPNSTFNLCYHTSDNVGNMIPRREPLAWSTRVQIALDSPRGLEYIHEHTIPVYIHRDVKPANILIYKDFHGKVKAAIWQGRRSMPVNGYEARAIMALLQCAETLEQHWWSSLDLSLVATTSSSKLGRESFIDLNLPAPAEQDDASQFEDSVVSDAEFVNPVK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2595 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Amo17g2595 387 ProSiteProfiles Protein kinase domain profile. 116 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2595 387 Gene3D Transferase(Phosphotransferase) domain 1 130 300 - -
Amo17g2595 387 Gene3D Annexin 26 107 IPR037104 GO:0005509|GO:0005544
Amo17g2595 387 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 100 298 IPR044812 GO:0019199|GO:0045087
Amo17g2595 387 SUPERFAMILY Annexin 49 99 IPR037104 GO:0005509|GO:0005544
Amo17g2595 387 Pfam Protein tyrosine and serine/threonine kinase 143 296 IPR001245 GO:0004672|GO:0006468
Amo17g2595 387 SMART tyrkin_6 141 355 IPR020635 GO:0004713|GO:0006468
Amo17g2595 387 SMART annex3 56 112 IPR018502 GO:0005509|GO:0005544
Amo17g2595 387 Pfam Annexin 53 98 IPR018502 GO:0005509|GO:0005544
Amo17g2595 387 SUPERFAMILY Protein kinase-like (PK-like) 119 298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2595 Amo-Chr17 125093405 125096710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2595 117 298 Receptor kinase-like Gene Family AT3G21630 50.000 1.45e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo17g2595 PK_Tyr_Ser-Thr 4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2595 - K13429 aip:110262853 225.713