Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2587 ATGGCAAATCATGGCGTAGCATCCTTTGACTACACAATATCAGTGGTTGTGCTGTGTAAAGACTTTCCATTTTCCACAAGGTGCCTCGATGAAGTTGCCAAGATCATGGAGTGTTATGACAAAAAAACGATGCAGGTTGTGGGACTTTTCTATGACGGCGTGATAGCTGCAGATGTACGTTGGCAGAAGGAAGATAGGGCATATGGCAAAGCCATCACTCAACATAAAGAGAGATTGGGATTGGGAGAAGAATCGGAGAAGATCAAAACATGGCGGTCTGCTTTGTTTAGAGTATGCGAACTCATTGCATTAAATTGCGACAAAAAGTATGAAACTGAGCTTATCAGTATGATTGCTAAAGGCGTCTCTGCTAGATTTCCTCCTTTGCGTTTACAAATCAAAGACGTAGTTGGATTAGATTCTCGCAACAATGATGCGGTTCAAATGCTAGCAATTTGTGGAGCTCCTGGCATAGGCAAAACCACATTTGCTGCATATATTTATAATAACATTATTAACAACCAATATATTGCTGCAAGTTTTATATCCAACATCAGAGATAAGCCAAAAGTGGAAGATCTCCAGTCGACGTTGTTATCTGAGATGGGCGAGAAGCGAGAGAGCAGGAGGGGCGATACAGATGGTGGAGGCAGAGAAATCAAACGCAAACTTAGCGTTAAAAAGGTTCTTTTAGTGTTGGATGGTGTTGATAAGATAGAACAGTTGAAATCGCTGGCTGGGGGGTGTGATTGGTTTGGTCCTGGCAGTAAAATTATTATAACAACAAGGGATGCAACTTTGTTGAATAGACATCGTGTTAAAATTAAGAGATATCAAATGACAGAGCTAAGTGATGATGACTCTCACAAACTCTCTTGTTGGTATGCCTTCGATGATAGCGAACCGGCACAAAACTTTGCAAATCTTGTTCCTCAAGCACTAAGTATTGCAAAGGGTGTTCCTTTGGCCTTAAAAAAACTGGGCTCTATATTGAAGGAATGGGAAATGGAATTGGACAGATATAACAAGGTTCCAGAGGCTTTCGAATTTTTGCTCAAATCTTTCGGAAACTGA 1074 0.4088 MANHGVASFDYTISVVVLCKDFPFSTRCLDEVAKIMECYDKKTMQVVGLFYDGVIAADVRWQKEDRAYGKAITQHKERLGLGEESEKIKTWRSALFRVCELIALNCDKKYETELISMIAKGVSARFPPLRLQIKDVVGLDSRNNDAVQMLAICGAPGIGKTTFAAYIYNNIINNQYIAASFISNIRDKPKVEDLQSTLLSEMGEKRESRRGDTDGGGREIKRKLSVKKVLLVLDGVDKIEQLKSLAGGCDWFGPGSKIIITTRDATLLNRHRVKIKRYQMTELSDDDSHKLSCWYAFDDSEPAQNFANLVPQALSIAKGVPLALKKLGSILKEWEMELDRYNKVPEAFEFLLKSFGN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2587 357 Pfam TIR domain 13 122 IPR000157 GO:0007165
Amo17g2587 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 342 IPR027417 -
Amo17g2587 357 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 346 - -
Amo17g2587 357 Pfam NB-ARC domain 144 343 IPR002182 GO:0043531
Amo17g2587 357 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 96 IPR035897 -
Amo17g2587 357 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 346 IPR044974 GO:0006952
Amo17g2587 357 Gene3D - 7 128 IPR035897 -
Amo17g2587 357 CDD AAA 132 239 - -
Amo17g2587 357 Gene3D - 131 277 IPR027417 -
Amo17g2587 357 PRINTS Disease resistance protein signature 317 331 - -
Amo17g2587 357 PRINTS Disease resistance protein signature 223 237 - -
Amo17g2587 357 PRINTS Disease resistance protein signature 149 164 - -
Amo17g2587 357 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2587 Amo-Chr17 124848978 124851801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2587 147 338 WRKY Transcription Factor Family AT5G45050 31.633 1.11e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2587 - - adu:107462955 617.846