Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2574 ATGGGGAAGTTGACACTCCCATTTGTGGGGATGATCATGGCCGAACTTGCTCAAGTTGGATTAATCATACTCAGCAAGCAAGTCATGGCAAAAGGAATGTCCAGCTTCATCTTCATTTTTTACTCCAATTCCCTTGCTTCCCTCATTCTTCTCCCTTCTTCCTTCTTCATCCACAGATTTAACCGCCCTCCAATTACCTTCTCCACCATTATTGGATGCTTCTTCCTTGGACTACTCGGTTTTATGGCACAGGCCTTTGGGTATGCTGGTATTAACTACAGTTCAGCTACACTCAGCACTGCAATGCTCAACCTTGTTCCTGGCTTTACCTTTGTACTTGCCGTTCTTTTCAGGTTGGAACAATTTGATTGGAGAAACTCTAGCAGTGTAGCTAAATCATTGGGAACAATAGTATCAATTGCTGGTGCATTCATTGCCACTTTGTACAAGGGCCCTGCAATTCTGATGGGACTATCACCTGCTAACTCATCTCTGCAGCCACTTTCGTCACAAGATCCCAACTGGATACTCGGAGGATTATTTCTTGCACTGGATTGTGTGATGGCTTCGGCATTTTTAATCGTACAGGCTTATGTTCTTAAGAAATATCCAGCAGAGTTCATTGTTGTATTCTTTTATTGCTTCTTTGTGGCCATTCAATCTGCTGTGACCTGTTTGGTTGTGGAAAGAGACATCGATGCTTGGAGCTTGGAACCGATGCAAAGATTGCTCACAGTTCTATACTCGGCAGTCTTTGGTTCTGTCTTTCAAGTTGGTGTTGCTACTTGGTGTTTACACCAGACAGGACCTGTTTTTGTTTGCATGTTCAAGCCTGTAGGAATCATCATATCGGTGGTCATAGGCGTTGTTTTCCTCGGCGATGCATTCTATCTTGGAAGTTTGGTTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTACTGTGGGGAAAAGCCAGAGATGTTGAACAAGTTAGCTTGGAATCAAGGGGGAAACAAATCCCTCTTTTGAAAGAAAACAACACTGAAGAGATATAA 1038 0.4306 MGKLTLPFVGMIMAELAQVGLIILSKQVMAKGMSSFIFIFYSNSLASLILLPSSFFIHRFNRPPITFSTIIGCFFLGLLGFMAQAFGYAGINYSSATLSTAMLNLVPGFTFVLAVLFRLEQFDWRNSSSVAKSLGTIVSIAGAFIATLYKGPAILMGLSPANSSLQPLSSQDPNWILGGLFLALDCVMASAFLIVQAYVLKKYPAEFIVVFFYCFFVAIQSAVTCLVVERDIDAWSLEPMQRLLTVLYSAVFGSVFQVGVATWCLHQTGPVFVCMFKPVGIIISVVIGVVFLGDAFYLGSLVGATVIVVGFYSVLWGKARDVEQVSLESRGKQIPLLKENNTEEI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2574 345 Pfam EamA-like transporter family 178 315 IPR000620 GO:0016020|GO:0016021
Amo17g2574 345 Pfam EamA-like transporter family 20 145 IPR000620 GO:0016020|GO:0016021
Amo17g2574 345 PANTHER WAT1-RELATED PROTEIN 8 324 - -
Amo17g2574 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 149 - -
Amo17g2574 345 PANTHER WAT1-RELATED PROTEIN 8 324 IPR030184 GO:0016021|GO:0022857
Amo17g2574 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2574 Amo-Chr17 124601409 124604706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2574 3 345 Nodulin-like Gene Family AT3G28050 44.928 8.59e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2574 - - gmx:100804932 544.658