Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2532 ATGGGTTTTTCTTTGATTGGTGTTTTATTCATGTTCTGCTTCAATGTAGAGTTAGCACTAGGCTCTGATACATGTCAAGGTTTGTCATGTGGATATCAAGAAATCCGGTTCCCTTTCAGAATCAAAGGCCGGCAGCCGCGAAACTGCGGCTACCCGGGCTTTGATCTGGTTTGCACAGACAGTAATGAGACTCTCATTGAGCTCCATGATTCACTGAATTTCAGTGTCAACAAGATTGACTATAGAAAGCAAACAATTGATTTATCATATCCTCATAATGGTTGCTTTCCTAGGCTTCTTCATAGCCTCAAACTTTCAGCTTCACCTTTCAACTTCAACATGAAGGTTGATCATAACTATGGTGACTATTATTTCTTTAACTGTTCAGCACTTGAAAGAGATTACATGGAACTTTTCTTGATTCAATGCCTAAGCACCTCGGCTAGTAGCATATATGCAGTTCCATCTTGGTCGGAAATCGAGGACTTGCCGCTTTCATTCTGCACGAAAATGTTCAATGTTTCATTAGTCCCGAGAATATTCGTTGATGAGGATGCTCCTCTTCATTTGAAATGGTCTGAACCAGACTGTGGACATTGTGAATCAAAAGGGAACAGGTGTAGTTGGAATAGTACAAAGAATGAATTCAGTTGTTTAGACAACCATAAAGGACCATCAACAGCTCTGGTTACAACAGGATCAGTACTGGGATCATTTTTCCTTATCCTGCTAACCGGTGCGATTTACTACATCTATGATACTTGCATAATACAAAAAGAAAAAGAAGCAATTATTGAAAAATTTCTTGAAGACTACAGAGCTCAAAAGCCAACCAGGTACTCTTATKCTGAAATCAAGAGAATTACCAATAACTTCRGCGACAAGYTAGGAGAGGGAGCCTATGGAACTGTCTTCAAAGGAAGCATCTCAAAAGAATTTACTGTTGCTGTGAAAATGCTGAATAATTCCCAGGGAAATGGGGAAGAGTTTGTCAATGAAGTTGGTATAATTGGTAAAATCCACCATGTCAACATTGTCCGGTTGGTTGGTTTTTGTGCTGATGGGTTCAGAAGAGCTCTTATCTATGAGTTCTTGCCGAATTCTTCGCTGCAGAAGTTCATAAATTCGCCGGACAACAAGAAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAAATTGCTTTAGGTGTAGCTAAAGGTATTGAGTACCTTCACCAAGGTTGTGATCAACGYATTCTCCATTTTGATATCAARCCTCAAAATGTGTTGCTAGAYCACAAYTTTACTCCSAAAATTTGTGATTTYGGTYTAGCTAAATTATGTTCCAAGGATCAAAGTGTAGTGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCCGAAGTTTTCTCAAGAAACTTTGGAAATGTATCTTACAAGTCTGATGTTTATAGCTACGGAATGATGCTACTTGAAACAATTGGAGGGAAGAAGATCACAGAGGATGTAGAAGAAAACAGCAGCCATATTTACTATCCTGAATGGATTCATAATCTTTTGGAAGAGAAGGAAGAAATGAGAATTCATATTGAAGATGAAGGGGATGCTAAAGTTGCTAAGCAGCTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAGGGAGACCAAGACACATTACCAATACCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTGGTGTGGCTGCAAGACAGATTATCCAAGATTTAGAAGTGATCCAAGAATTAGACTGA 1818 0.3944 MGFSLIGVLFMFCFNVELALGSDTCQGLSCGYQEIRFPFRIKGRQPRNCGYPGFDLVCTDSNETLIELHDSLNFSVNKIDYRKQTIDLSYPHNGCFPRLLHSLKLSASPFNFNMKVDHNYGDYYFFNCSALERDYMELFLIQCLSTSASSIYAVPSWSEIEDLPLSFCTKMFNVSLVPRIFVDEDAPLHLKWSEPDCGHCESKGNRCSWNSTKNEFSCLDNHKGPSTALVTTGSVLGSFFLILLTGAIYYIYDTCIIQKEKEAIIEKFLEDYRAQKPTRYSYXEIKRITNNFXDKLGEGAYGTVFKGSISKEFTVAVKMLNNSQGNGEEFVNEVGIIGKIHHVNIVRLVGFCADGFRRALIYEFLPNSSLQKFINSPDNKKNFLGWKKLQEIALGVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFTPKICDFGLAKLCSKDQSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGKKITEDVEENSSHIYYPEWIHNLLEEKEEMRIHIEDEGDAKVAKQLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTLPIPPNPFASTGPSRKYAKIGVAARQIIQDLEVIQELD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2532 605 SMART serkin_6 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2532 605 Gene3D Phosphorylase Kinase; domain 1 264 364 - -
Amo17g2532 605 Pfam Wall-associated receptor kinase galacturonan-binding 25 88 IPR025287 GO:0030247
Amo17g2532 605 PANTHER RECEPTOR-LIKE KINASE 33 604 - -
Amo17g2532 605 ProSiteProfiles Protein kinase domain profile. 290 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2532 605 Gene3D Transferase(Phosphotransferase) domain 1 365 568 - -
Amo17g2532 605 Pfam Protein kinase domain 293 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2532 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Amo17g2532 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 33 604 IPR045874 GO:0004672
Amo17g2532 605 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Amo17g2532 605 SUPERFAMILY Protein kinase-like (PK-like) 273 562 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2532 Amo-Chr17 123712345 123715389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2532 1 581 Receptor kinase-like Gene Family AT1G66910 35.479 1.67e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo17g2532 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2532 - - lang:109328752 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2532 17 123712345 123715389 Amo17g2532 17 123712345 123715389 ECH