Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2531 ATGTCATCCCTGCTGCTGGTGATGTTGCTGCTGCTATGCTGTATAAGCATGAGAACAAGCGATGCAAAAAACTGTTCATCAATATGGTGCGGGAAACATAACATAAAGCACCCTTTCAGGCTTCAAAACAGTTCAGTTCACTGTGGTGACCACAGGTACACCCTCTCTTGCGAGGATCATCACCAACTTTTCCTGTATTGGAAATCAGCCAAGTTCAGTGTTCAATCAATTAACTACAACAACTACACTATCCGATTAGTGGATGCAAATTTTGCCTTACTACATATGCATCATCATCACTACTACTCTAACTCTTCCCCACTCCTTAATTATTCCTTAGCTTCCTACAATTTCAGTGATTATGAAACTGATGAGCCGTATCAGTATTTGTTATACAAAGTGAATGGAGATAGGCTTATGGTCATGAAGCAGATGATATATGTGAGGTGCATCAACGACACTTTCTATGTGAATTTTGATGGCAAGTCTCTGTGGGAATTGGGGCTGAGAGACTCCTGTTATGTAGAGTGGATGTATCCAACATCTTGGCCTCACGATGAAGAATGCAAAATCAACAACATTTCATGTAGAGACAACCGCAACATGCTTCTCTATGGTTTTGAACTTTCTTGGGCAGTTAGTTCTTGCAACCGTTACTTTCGGGACCAAGTCGAGATCGATGATCATAACAACGTTTTGTGTTATCCTGTTTTTATGCCACTATTTGCAGGTACTCTAATTGGAGGAATAACTTTGTATGTTCTTCTCAAATTTTTACTAGTTGGAGTTCCATTCATCATTCTTTTATGCATATATAAATGGCGACGGAGGCATTTATCTGTGTATTCGACTATTGAAGATTTTCTTCGAAGCGACAATAGTATTATGCCAATTAGATACTCCTACAAGGATATCAAGAACATAACTGGAGTGTTCAAGACAAAACTTGGGAATGGAGGCTACGGTTCTGTCTTCCAAGGAAAACTTCGAAGTGGTCGCCTTGTAGCCGTCAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTTATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCATAGAGGGATCAAAGCGTGCTCTCATATATGAGCTGATGGAAAATGGATCATTAGAAAAATACATATTTTTCCCTAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTAGAATAGCACGTGGTATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGATATCAAGCCTCACAACATTCTTTTGGATGATAACTTCAACCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCACTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATATAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTATGATTATGGCAGATGGAAGGGAAATAACAATAGAAAATGA 1626 0.3924 MSSLLLVMLLLLCCISMRTSDAKNCSSIWCGKHNIKHPFRLQNSSVHCGDHRYTLSCEDHHQLFLYWKSAKFSVQSINYNNYTIRLVDANFALLHMHHHHYYSNSSPLLNYSLASYNFSDYETDEPYQYLLYKVNGDRLMVMKQMIYVRCINDTFYVNFDGKSLWELGLRDSCYVEWMYPTSWPHDEECKINNISCRDNRNMLLYGFELSWAVSSCNRYFRDQVEIDDHNNVLCYPVFMPLFAGTLIGGITLYVLLKFLLVGVPFIILLCIYKWRRRHLSVYSTIEDFLRSDNSIMPIRYSYKDIKNITGVFKTKLGNGGYGSVFQGKLRSGRLVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCIEGSKRALIYELMENGSLEKYIFFPKNDSLSCEKLYTISLRIARGIEYLHNGCDMKILHFDIKPHNILLDDNFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDYGRWKGNNNRK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2531 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Amo17g2531 541 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Amo17g2531 541 Gene3D Transferase(Phosphotransferase) domain 1 385 535 - -
Amo17g2531 541 Pfam Protein kinase domain 313 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2531 541 Gene3D Phosphorylase Kinase; domain 1 289 384 - -
Amo17g2531 541 ProSiteProfiles Protein kinase domain profile. 310 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2531 541 Pfam Wall-associated receptor kinase galacturonan-binding 25 88 IPR025287 GO:0030247
Amo17g2531 541 SUPERFAMILY Protein kinase-like (PK-like) 292 524 IPR011009 -
Amo17g2531 541 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 531 IPR045874 GO:0004672
Amo17g2531 541 PANTHER SERINE/THREONINE KINASE, PUTATIVE-RELATED 30 531 - -
Amo17g2531 541 SMART serkin_6 310 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2531 Amo-Chr17 123707674 123710712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2531 3 529 Receptor kinase-like Gene Family AT5G38260 35.401 1.10e-86 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo17g2531 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2531 - - ahf:112704953 895.96