Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2525 GCTTCAAAACAGTCAGTTCACTGTGGGGACCACAGGTACACCCTCTCTTGCGAGGATCATCACCAACTTTTCTTGTATTGGAAATCAGCCAATGATTCTGAAACTGAGCCGTATCAGTATTTTTTATACAAAGTGAATGGAGATAGGCTTATGTTCATGAAGCAGATGATATATGTGAGGTGCATCAACGACACTTTCTATGTGAATTTTGATGGCAAGTCTCTCTGGGAATTGGGGCTGAGAGACTCGTGTTATATAGAGTGGATGTATCCAACATCTTGGCCTCACGATGAAGAATGCAAAATCAACAACATTTCATGTAGAGACAACCGCAACATGCTTCTCTATGGTTTTGAACTTTCTTGGGCAGTTAGTTCTTGCAACCGTCACTTTTGGTACCGAGCCGAGATCGATGATCATAACAACGTTAATTGTTATCCTGTTTTTGTGCCACTATTTGCAGCTCTGTATGTTCTTGTCAAATTTTTACTAGTTGGAGTTCCATTCATCATTCTTTTATGCATATATAAATGGCGACGGAGGCATTTATCTGTGTATCCGACTATTGAAGATTTTCTTCGAAGCGACAATAGTATTATGCCAATTAGATATTCCTACAAGGATATCAAGAACATAACAGGTGTTCAAGACAAAACTGGGGAATGGAGGCTACGCCGCCTTGTAGCCGTCAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTGGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAACTCTACATCATTTCCCTTGGAGTAGCACGTGGAATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAGAACTTCAACCCAAAAGTGTCTGATTTTGGACTTGCAAGACTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGAAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCGAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCTAGTCAGATATATTTTCCCTTTTGGATTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCACTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACTCACAGAAGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTCTAGTGACGTCTCTTCAGTTAGTGATTCAAAGGAATAG 1569 0.3952 ASKQSVHCGDHRYTLSCEDHHQLFLYWKSANDSETEPYQYFLYKVNGDRLMFMKQMIYVRCINDTFYVNFDGKSLWELGLRDSCYIEWMYPTSWPHDEECKINNISCRDNRNMLLYGFELSWAVSSCNRHFWYRAEIDDHNNVNCYPVFVPLFAALYVLVKFLLVGVPFIILLCIYKWRRRHLSVYPTIEDFLRSDNSIMPIRYSYKDIKNITGVQDKTGEWRLRRLVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYIISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTEARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWIYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDALTEENVEDTTTHNSSKLSSSDVSSVSDSKE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2525 522 MobiDBLite consensus disorder prediction 503 522 - -
Amo17g2525 522 ProSiteProfiles Protein kinase domain profile. 157 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2525 522 MobiDBLite consensus disorder prediction 481 522 - -
Amo17g2525 522 Pfam Protein kinase domain 225 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2525 522 SUPERFAMILY Protein kinase-like (PK-like) 222 474 IPR011009 -
Amo17g2525 522 PANTHER RUST RESISTANCE KINASE LR10-RELATED 136 490 IPR045874 GO:0004672
Amo17g2525 522 SMART serkin_6 206 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2525 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Amo17g2525 522 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 136 490 - -
Amo17g2525 522 Gene3D Transferase(Phosphotransferase) domain 1 282 485 - -
Amo17g2525 522 Gene3D Phosphorylase Kinase; domain 1 215 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2525 Amo-Chr17 123634155 123638830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2525 162 497 Receptor kinase-like Gene Family AT5G38260 45.455 1.25e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo17g2525 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2525 - - ahf:112704953 865.914