Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2522 ATGTTATCCCTTTTTTCATCTTTGGTACCCCTTCTACTGCTGCTGGGGATCTCCTTATTCGTTTTCAATGTTTTTAGTGGTGGCAACATGTGGACTACCGAGGAAGCTTATGCAGACAAAAGAATGTGTTCATCTGGGTGGTGTGGGAGGCATGATATAAGGTACCCTTTCAGGCTGAATAATAGTAGTCCAAGCCACTGTGGTGACCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCGATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGCAGATGCTAATGTTGCTCTGCATAGTCATGATCTCTCTTACCCCCTTCCTTATTCTTTAACTCCCTCCAACTTCACCGGAGCCCAAGATGAACCATATCAAGATAGGTTCTATAAACAGCATTTTTATCATGTTATTAGACTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTTCTGCTGCTGCAACTTGCATGAATGGATCTTATGCGCTTGGGAGTACATTATATGTCAGTGATATTGATAAAACTCTCCAGGATTTGGCGTTCGTAGACTCCTGTCATATAGAGTGGATGTATGTGACTTCATGGCCGGCTGAAATCAAACACAGAAATAATTCATGCACAGACATCCATTATATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTATGAGGCCATGCTAGCTGATCATAACAAAGTCATTTGTTATACTGATGAGCCGTCACTTATTTTACTAGACTCAATGTATGTGCTTGGAACGGTTTTATTTGTTCTTGCCAAATTTGCACTTGGAGCTCCATGCGTCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATACGACAGTATCGAAGATTTTCTGCGAAGTGACAACAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGAAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAATGAGGCCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGTTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTATATGAGTTAATGCAGAATGGCTCTTTAGAAAAATACATATTTTCACCAAAAGAGAGTGTTTCCTTAAGTTGTGAAGAGCTCCACACCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCACTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAAATTGAAAATTCCAGCCAGATATATTTTCCATTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACAAAGATGAAGAGATGAAGATAGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGAGAATGMTGAAGATAKTYCAACTWARAACAGTTCAAAATTATCCTCTGATGACATCTCTTCAGTCAYTGATTCAAAGGAATAG 1974 0.3961 MLSLFSSLVPLLLLLGISLFVFNVFSGGNMWTTEEAYADKRMCSSGWCGRHDIRYPFRLNNSSPSHCGDHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLADANVALHSHDLSYPLPYSLTPSNFTGAQDEPYQDRFYKQHFYHVIRLTKQMVYLMRCPPYGVESSSAAATCMNGSYALGSTLYVSDIDKTLQDLAFVDSCHIEWMYVTSWPAEIKHRNNSCTDIHYMLLYGFELSWLKVYCKYEAMLADHNKVICYTDEPSLILLDSMYVLGTVLFVLAKFALGAPCVIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITEKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNEAKSNGQEFINEVVTIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPKESVSLSCEELHTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQIENSSQIYFPFWVYDELQDGREITIENDKDEEMKIAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENXEDXXTXNSSKLSSDDISSVXDSKE* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2522 657 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 41 249 - -
Amo17g2522 657 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 280 634 - -
Amo17g2522 657 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Amo17g2522 657 SMART serkin_6 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2522 657 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Amo17g2522 657 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
Amo17g2522 657 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Amo17g2522 657 MobiDBLite consensus disorder prediction 609 657 - -
Amo17g2522 657 PANTHER RUST RESISTANCE KINASE LR10-RELATED 280 634 IPR045874 GO:0004672
Amo17g2522 657 PANTHER RUST RESISTANCE KINASE LR10-RELATED 41 249 IPR045874 GO:0004672
Amo17g2522 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Amo17g2522 657 MobiDBLite consensus disorder prediction 634 649 - -
Amo17g2522 657 ProSiteProfiles Protein kinase domain profile. 338 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2522 657 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Amo17g2522 657 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2522 Amo-Chr17 123594970 123597804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2522 40 620 Receptor kinase-like Gene Family AT5G38260 37.068 6.22e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo17g2522 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2522 - - aip:107607706 1112.06