Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo17g2521 | ATAGTGATTAGAGTGGGTAGTTATTTGAACTTAGTCTCCACTTTCCTCCTTGCTTGCTTTGGTGTAGTTCATCTTGCGCATGGCTCTAATAGTGATACTACCTGTCCGGATTTCTTGTGCGGAAATCAAGAAATTCGATTCCCTTTTAGAATCAAAGGCCGTCAGTCACAAAGCTGTGGCTATCCGGGCTTTGATCTGGTTTGCTCAGGTACTAGTGATGATGAGAAACTGTTTCTTGAGCTCCCTGAATCAGTGACCTTCAATGTCAAACACATCGACTATACAAAACAAACAATTGAATTAACCCCTCCATCTACCTGCCTTCCAAAGCAGCTCCATAACCTCAGTAATATCTCTGTCTTAGTTTTCCCTTTCCAACGCATGCTAGTTGAGGAGGGTGATGACTATCACTTCTTCAACTGTTCACCAGTGGCAATGGATACATATATAAACAATAACATCATGATTCCATGCCTAAGCAGCTCAACCAGTCAAGTATATGCCATTTCATCTTGGAATTCTATCCATGACCTGACAACCCTGTTTCCTTGCACCAAAATGTTCAATATTTCATCCCTCCCAGATGCACTTGTTCCAGCTCTGAAAGATACTCTTGTTTTGTTTTGGTCTGAACCAAGCTGTCAACAATGTGAATCGYAGGGWAAAAGGTGCAGCTGGAACAACAGCACCAAGAATCAACTTGATTGTCTTGRTAATGTCATCCACAYGGATTCATCAACAGCTCTAGTAACCACAATAGGATCAGTACTTGGATCGTTTTTGCTTGTCCTACTGACCGGAGCGATTTATTACATCTATGACTCTTGCATAATGCAAAAGGAAAAACAAGCAATTATTGAAAAATTTCTTGAAGATTACAGGGCTCAAAAACCAACCAGATATTCTTATACCGAAATCAAGAGAATCACCAACAACTTTGGGTACAAGTTAGGAGAGGGCGCCTATGGAACTGTCTTCAAAGGAAGCATCTCAAAAGAATTTCCTATTGCAGTGAAAATGCTGAATAATTCCCAGGGYAASGGGGAGGAGTTTGTRAATGAAGRTGGTATAATTGGTAGAATCCACCATGTCAATATTGTCKGGTTGGTTGGTTTCTGTGCTGATGGGTTCAGAAGAGCTCTTGTCTATGAATTCTTGCCGAATTCTTCYCTGCAGAAGTTCATAAATTTGCCCGACAACAAGCAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAGATTGCTCTAGGTGTAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGATATCAAACCTCAAAATGTGTTGCTAGATCACAACMTTACTCCAAAAATTTGTGATTTCGGTCTAGCTAAATTATGRTCCAAGGATCAAAGTGTAYTGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCCGAAGTTTTCTCAAGYAACTTTGGAAATGTATCTTACAAGTKTGATGTTTACAGTTATGGAATGATGCTGCTAGAAACAATTGGAGGGAAGAAGATCACAGAGGATATAGAAGAAAACAGTAGCCATGTTTACTATCCAGAATGGATGCATAGTATTTTAGAAGAGACTGATGAAATCAGAATTCATATTGAAGATGAAGAAGATGCTAAAATTGCTAAGAAACTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAGGGAGACCAAGACACASTAWCAASSCCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTAGTGTGCCTGCAAGACAAATTACCCAAGATTTAGAAGTGATCCAAGAGTTAGATTAA | 1881 | 0.3977 | IVIRVGSYLNLVSTFLLACFGVVHLAHGSNSDTTCPDFLCGNQEIRFPFRIKGRQSQSCGYPGFDLVCSGTSDDEKLFLELPESVTFNVKHIDYTKQTIELTPPSTCLPKQLHNLSNISVLVFPFQRMLVEEGDDYHFFNCSPVAMDTYINNNIMIPCLSSSTSQVYAISSWNSIHDLTTLFPCTKMFNISSLPDALVPALKDTLVLFWSEPSCQQCESXGKRCSWNNSTKNQLDCLXNVIHXDSSTALVTTIGSVLGSFLLVLLTGAIYYIYDSCIMQKEKQAIIEKFLEDYRAQKPTRYSYTEIKRITNNFGYKLGEGAYGTVFKGSISKEFPIAVKMLNNSQGXGEEFVNEXGIIGRIHHVNIVXLVGFCADGFRRALVYEFLPNSSLQKFINLPDNKQNFLGWKKLQEIALGVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNXTPKICDFGLAKLXSKDQSVLSMTAARGTLGYIAPEVFSSNFGNVSYKXDVYSYGMMLLETIGGKKITEDIEENSSHVYYPEWMHSILEETDEIRIHIEDEEDAKIAKKLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTXXXPPNPFASTGPSRKYAKISVPARQITQDLEVIQELD* | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo17g2521 | 626 | Pfam | Wall-associated receptor kinase galacturonan-binding | 35 | 101 | IPR025287 | GO:0030247 | |
Amo17g2521 | 626 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 432 | 444 | IPR008271 | GO:0004672|GO:0006468 | |
Amo17g2521 | 626 | SUPERFAMILY | Protein kinase-like (PK-like) | 294 | 583 | IPR011009 | - | |
Amo17g2521 | 626 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 35 | 625 | IPR045874 | GO:0004672 | |
Amo17g2521 | 626 | SMART | serkin_6 | 311 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo17g2521 | 626 | Gene3D | Phosphorylase Kinase; domain 1 | 284 | 385 | - | - | |
Amo17g2521 | 626 | Gene3D | Transferase(Phosphotransferase) domain 1 | 386 | 591 | - | - | |
Amo17g2521 | 626 | PANTHER | RECEPTOR-LIKE KINASE | 35 | 625 | - | - | |
Amo17g2521 | 626 | ProSiteProfiles | Protein kinase domain profile. | 311 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo17g2521 | 626 | Pfam | Protein kinase domain | 315 | 580 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo17g2521 | 626 | ProSitePatterns | Protein kinases ATP-binding region signature. | 317 | 339 | IPR017441 | GO:0005524 | |
Amo17g2521 | 626 | MobiDBLite | consensus disorder prediction | 583 | 603 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo17g2521 | Amo-Chr17 | 123544669 | 123547172 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo17g2521 | 36 | 621 | Receptor kinase-like Gene Family | AT1G66910 | 34.748 | 4.28e-107 | 336 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Amo17g2521 | Pkinase | 4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo17g2521 | - | - | mtr:MTR_1g031540 | 733.791 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo17g2521 | 17 | 123544669 | 123547172 | Amo17g2521 | 17 | 123544669 | 123547172 | ECH |