Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2520 ATGTTAAACCTTTGTACATTTTTTATACACCTTCTACTGCTGCTGTGGATCTCCTTACGAGTTTTCGATATTTATGCCACCCGGTGGAATACCAAGGTGGCAAAGGATTCAGACAAAAGAATGTGTTCATCTGAATGGTGTGGGAGGCATGACATAAGGCACCCTTTCAGGCTGAATAATAGTAGTCCAAGCCATTGTGGTGAGCACATGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTGTATCTCAAATCAATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGTAGATGCTAATGTTGCTCTGCATAGTCATGATCTCTCTTACCCCCTTCCTTATTCTTTAATCCCCTCCAACTTCACCGGAGCCCAAGATGAACCATATCAATATCGGATCTATAAACAGAATTTTGATTTTATTAGATTGACAAAGCAGATGCTATATTTGAAGTGCCCACCGTATGGAGTAAAATCTTCTGCTACTGCTGCTGCAACAACCTGCATGAATGGATCTTATTCTCTTGGGAGTACATTCTATGTAAGTGATCTTGATAAAACTCTCCAAGATTTGGCGTTCAGAGACTCGTGTCATGTAGAGTGGATGTATCTGACTTCATGGCCTACTGAAATTGAAGACAGAAATATTTCATGCACAGACATCCATCATATGCTGCTTTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTATGCTGCCATGCTCAGTGATCATAACAAAGTCATTTGTTATAAGCCTTCATTTATTATACCTGAAAGTTTCCTATTGTCAAGGTATGTTCAGGTTCTAATATTTGGAACGGTTTTATTTGTTCTTGCCAAATTTGCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATATGACAGTATCGAAGATTTTCTGCAAAGCGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAATGAGGCCAAATCCAATGGCCAAGAATTCATCAARGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTATATGAGTTAATGCAGAATGGCTCTTTAGAAAAATACATATTTTCACCAAAAGAGAGTGTTTCCTTAAGTTGTGAAGAGCTCCACACCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCAGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCACAATCTCATACAAAGCCCATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGATTTATGATCAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGGGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGAGAATGGTGAAGATAATACAACTCACAACAGTTCAAAATTATCCTCTGATGACGTCTWTTCAGTCAGTGATTCAAAGGAATAG 1989 0.3896 MLNLCTFFIHLLLLLWISLRVFDIYATRWNTKVAKDSDKRMCSSEWCGRHDIRHPFRLNNSSPSHCGEHMYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVALHSHDLSYPLPYSLIPSNFTGAQDEPYQYRIYKQNFDFIRLTKQMLYLKCPPYGVKSSATAAATTCMNGSYSLGSTFYVSDLDKTLQDLAFRDSCHVEWMYLTSWPTEIEDRNISCTDIHHMLLYGFELSWLKVYCKYAAMLSDHNKVICYKPSFIIPESFLLSRYVQVLIFGTVLFVLAKFALGAPCIIIFCIYKWRRRHLSIYDSIEDFLQSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNEAKSNGQEFIKEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPKESVSLSCEELHTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKAHVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWIYDQLQDGREITIENDSDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVGEMLEQDDDLEMPPKPYFYPLDAPTEENGEDNTTHNSSKLSSDDVXSVSDSKE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2520 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Amo17g2520 662 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 247 IPR045874 GO:0004672
Amo17g2520 662 PANTHER RUST RESISTANCE KINASE LR10-RELATED 285 639 IPR045874 GO:0004672
Amo17g2520 662 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
Amo17g2520 662 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2520 662 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Amo17g2520 662 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 5 247 - -
Amo17g2520 662 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 285 639 - -
Amo17g2520 662 SUPERFAMILY Protein kinase-like (PK-like) 323 614 IPR011009 -
Amo17g2520 662 MobiDBLite consensus disorder prediction 605 662 - -
Amo17g2520 662 ProSiteProfiles Protein kinase domain profile. 343 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2520 662 MobiDBLite consensus disorder prediction 605 621 - -
Amo17g2520 662 Gene3D Phosphorylase Kinase; domain 1 320 417 - -
Amo17g2520 662 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Amo17g2520 662 Pfam Protein kinase domain 346 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2520 Amo-Chr17 123541217 123544129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2520 36 625 Receptor kinase-like Gene Family AT5G38260 35.714 4.35e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo17g2520 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2520 - - aip:107607706 1156.74