Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2505 ATGTATGCAGAAACCGGTCTTCTCTTACCACACATGCAGAACTTCTCTAATCACGACCTTCATCAACTCGACGAGTACTGCAACACCTTCAAGTCTAATGCTTCATTGAGTGATCCTGTTCAATCTTCTGTCATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCCCCGGAACCTGTTTTTGAAGAGTCATTCATGAACCTGGATCCTGTGACAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCTGCTGATATTGATGTTCTTCAAAAGGAACAGCTTCTGAGTGATGTGTTTTATGAGTGTGAAAAGGATCTCTTAGAAAAGGCAGCAATGGACTTGCCGTTCTCCGATATTCTGGAAATCAAAGTTCCTGTTCTTAACACAGAGGAGAACTCAATTGAAGAAAAGAAACAATTTCTAGACATGCCACCATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGCTACAATGAAGCCTGCTTTCCTCGATGTCCCAGGAATAGATTTCGATGAAGTTTATGGCATGAGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGTAATGGCAATCTGAACATAGTCCAGTCTCCCCACGAGAGGCGTTTGCTTATCGGCAGTAGCATCAAAGAGGAACGCCAAGAGAAGCTATCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCTAGAATCCGTGGAAGATTTGCGAAAACCGAAGAATATGATACCAAGAGGCAATGA 852 0.4319 MYAETGLLLPHMQNFSNHDLHQLDEYCNTFKSNASLSDPVQSSVMSEYDLAAEGDLFKAPEPVFEESFMNLDPVTAAISMISCGEDVSSQGLKSADIDVLQKEQLLSDVFYECEKDLLEKAAMDLPFSDILEIKVPVLNTEENSIEEKKQFLDMPPLPKSVSSGSLSSMDWMHGATMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPHERRLLIGSSIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2505 283 PANTHER CCT MOTIF FAMILY PROTEIN 28 281 - -
Amo17g2505 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 281 - -
Amo17g2505 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Amo17g2505 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2505 Amo-Chr17 122982268 122986688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2505 228 279 C2C2-CO-like Transcription Factor Family AT3G21880 49.057 1.41e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo17g2505 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2505 - - gmx:100814332 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2505 17 122982268 122986688 Amo17g2505 17 122982268 122986688 ECH