Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2495 ATGAACGAGAAGAGGAATCCAAAGCGTCCAAGATCACTGTATTCCAAAATGCCTATGACAGACTCTAATGATGTGCAGAGTTTTGATAATAGCATTGTTTTCCCTGTCGAAGACATTGTGCAATATCCCTTGCCTGGCTATGTATCACCATTTTCAATAAGTTTCAGTCCTGATGATAGTTTGGTATCTTATTTATTTAGCCCTGATCACACATTAAATAGAAAGGTTTTCGCATATGATCTGAAGACCAACAAGCAAGAATTGTTATTTAGCCCTCCTGATGGCGGACTTGATGAGAGTAATATTTCTGCCGAAGAAAAGTTGAGGAGGGAAAGGTTGAGGGAGCGCGGGTTAGGAGTGACGCGGTATGAATGGGTGAAGACAAGCTCGAAAAGAAAAGCACTCGTGGTGCCATTGCCCGCTGGGATTTATGTTCATGATATTTCCAATTCAAAATCAGAGCTGAAGCTTCCAAGTACATCAGCTTCACCCATTATTGATCCGCATCTGTCCCCGGATGGATCGATGCTTGCTTATGTAAGAGACTGGGAGTTGCACGTGCTGAACCTCTTGACTAACGAATCAAAGCAGTTGACCCACGGTGCAGCTGGAAATGGTTTGACTCATGGGCTTGCCGAATATATAGCTCAGGAGGAGATGGATAGGAAAACAGGATATTGGTGGTCACTGGACAGTAAATATATAGCTTTTACTGAAGTTGATTCTTCTGAAATACCACTCTTTAGAATCATGCACCAGGGTAAGAGCTCGGTTGGTCTAGATGCACAGGAAGACCATCCTTATCCTTTTGCCGGAGCTTCAAATGTTAAAGTGCGCCTAGGGGTGGTTTCTGTTTCGGGAAGCTCTACCAGTTGGATGGATCTTCGGTGTGGGGGTTTGGAACAGCAAGACAATGAAGAAGAATATTTGGCCAGAGTAAATTGGATGCATGGAAACATTCTGACTGCTCAGGTTTTGAACAGGAAACACACTAAAATAAAGATCCTAAAGTTTGATGTCAAAACAGGCCAGAGGAAAACTATGTTGGAGGAAGAAAACAACACTTGGATCAATATACATGACTGCTTTACACCTCTTGATAAAGGAGTTACGAAGTTCTCAGGTGGTTTCATCTGGGCCAGTGAAAAAACAGGATTTAGACATCTTTATGTTCATGATGCAAATGGGACTTGTTTAGGTCCCATCACTGAAGGTGAATGGATGGTTGAGCAAGTAGCTGGTGTGAATGAGGCTACAGGATTAATATATTTCACTGCGACCTTAGACAGTCCTCTGGAGTCCAACTTATATTGTACTAAATTTTTTGTCGATGGAAGTCAGCCACTTCAAATCCCTGTCAGGCTTACACACGGCAAGGGGAAACACATTGTTGTCCTTGATCATCATATGCGAAGTTTTGTTGATATCCACGACTCGCTTGATTCTCCTCCTAAGGTGTTACTTTGCTCCTTAGAGGATGGAAGCATAATAAGGTCTTTGTATGAGCAGTCTTTTACGATTCCAACCTCCAAAAAGCTTCAACTTGAACCACCAGAGATTGTTGAAATACAGGCCAATGATGGCACTACATTGTATGGGGCTCTATACAAGCCTGATGCCTCAAGATTTGGACCTCCACCGTACAAAACCATGATCAGTGTTTATGGTGGTCCAAGTGTACAGCTTGTTTGTAACTCTTGGCTTAGTACAGTTGACATGAGAGCGCAATATTTGAGAAACCGAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCAAGACGTGGGTTGAAGTTTGAAAGCCATTTCAAGAGCAAACTAGGTCAAGTTGATGCTGATGATCAGCTAACTGGAGCAGAGTGGCTTGTCAAACAAGGGCTTGCAAAAGCTGGCCACATTGGATTGTATGGGTGGAGCTATGGCGGTTACCTCTCGGCTATGGCCCTGTCAAGATATCCAGATTTCTTCAAATGTGCCGTGGCCGGTGCGCCTGTTACGTCATGGGATGGATATGACACATTCTACACGGAGAAGTACATGGGATTGCCATCCGAAAATCAATCCGGGTACGAATGTGGCGCAGTGATGAACCACGTACACAAGTTGAAAGGAAGGTTGTTGCTTGTGCATGGCATGATTGATGAAAATGTACATTTTAGGCACACTGCTAGGCTTGTTAATGCTCTTGTGGCAGCTGGAAAACCATACGAGCTAATAATCTTCCCGGACGAACGTCACATGCCACGGCGCCATAGAGACCGAGTTTATATGGAAGAGAGGATATGGGACTTCATTGAAAGGAGTCTGTAA 2313 0.4367 MNEKRNPKRPRSLYSKMPMTDSNDVQSFDNSIVFPVEDIVQYPLPGYVSPFSISFSPDDSLVSYLFSPDHTLNRKVFAYDLKTNKQELLFSPPDGGLDESNISAEEKLRRERLRERGLGVTRYEWVKTSSKRKALVVPLPAGIYVHDISNSKSELKLPSTSASPIIDPHLSPDGSMLAYVRDWELHVLNLLTNESKQLTHGAAGNGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLDAQEDHPYPFAGASNVKVRLGVVSVSGSSTSWMDLRCGGLEQQDNEEEYLARVNWMHGNILTAQVLNRKHTKIKILKFDVKTGQRKTMLEEENNTWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYVHDANGTCLGPITEGEWMVEQVAGVNEATGLIYFTATLDSPLESNLYCTKFFVDGSQPLQIPVRLTHGKGKHIVVLDHHMRSFVDIHDSLDSPPKVLLCSLEDGSIIRSLYEQSFTIPTSKKLQLEPPEIVEIQANDGTTLYGALYKPDASRFGPPPYKTMISVYGGPSVQLVCNSWLSTVDMRAQYLRNRGILVWKLDNRGTARRGLKFESHFKSKLGQVDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMALSRYPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQSGYECGAVMNHVHKLKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELIIFPDERHMPRRHRDRVYMEERIWDFIERSL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2495 770 SUPERFAMILY alpha/beta-Hydrolases 517 769 IPR029058 -
Amo17g2495 770 Pfam Prolyl oligopeptidase family 571 769 IPR001375 GO:0006508|GO:0008236
Amo17g2495 770 PANTHER DIPEPTIDYL-PEPTIDASE 4-RELATED 32 760 - -
Amo17g2495 770 Gene3D - 36 510 - -
Amo17g2495 770 Gene3D alpha/beta hydrolase 511 770 IPR029058 -
Amo17g2495 770 MobiDBLite consensus disorder prediction 1 22 - -
Amo17g2495 770 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 484 IPR002469 GO:0006508
Amo17g2495 770 SUPERFAMILY DPP6 N-terminal domain-like 49 508 - -
Amo17g2495 770 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 32 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2495 Amo-Chr17 122450747 122456226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2495 464 768 Carbohydrate Esterase AT5G36210 23.659 4.50e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2495 K01278 - gmx:100812178 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0442 08 8473268 8478733 Amo17g2495 17 122450747 122456226 hybridization