Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo17g2492 | ATGGCTCCTGTGTACATGGCATTCCTTCGTTTTATGGGTGATGAGAATGAGGCTCGGAACTATAGCTATAGCCTAGAGGTTGGGGCCAATGGCAGGAAACTCATCTGGGAGGGTACGCCTAGAAGTGTTCGGGATAGCCACCGGAAAGTTAGGGATAGTCATGATGGCCTCATTATTCAACGAAACATGGCCCTATTTTTCTCTGGTGGGGATAGGAAGGAGCTGAAGCTCAGAGTCACTGGAAGAATATGGAAGGAACAACAGAATCCAGATGGTGGAGTGTGCATACCAAATCTTTGTAGCTGA | 306 | 0.4771 | MAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDGGVCIPNLCS* | 102 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo17g2492 | 101 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1 | 80 | IPR008974 | GO:0005515 | |
Amo17g2492 | 101 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 1 | 93 | - | - | |
Amo17g2492 | 101 | Pfam | Seven in absentia protein family | 2 | 80 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Amo17g2492 | 101 | PANTHER | OS05G0238200 PROTEIN | 1 | 93 | - | - | |
Amo17g2492 | 101 | SUPERFAMILY | TRAF domain-like | 2 | 84 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo17g2492 | Amo-Chr17 | 122392782 | 122393087 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo17g2492 | 1 | 87 | C3H Transcription Factor Family | AT2G41980 | 80.460 | 6.24e-49 | 155 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo17g2492 | K04506 | - | fve:101313744 | 210.305 |