Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2490 ATGTTTCTTGTGCATCCAAGCAATTCGGGGTGGCTTACGATGCATTGTCTTTTAAGCAATCTTGATAAGCTCAAGGCCAGGATGCAACACGCAATTAGGATTCAGAGAGCTATTCTAAGGCAAGGTAGCACTGCGATTACGAAGAATGGGTGCATAAGAAGTGGGAGGAAGTTTCGGTGGGTGAAGCTTGAGGATTCGGCTGACACCAAGTTGCTTGGTTATCCGCAGGCTTTGACTAAGTTCTGTTATTTCCTTATGGATGCTTTGAGAGAGAAGGGGGCAAGGATGAAACCTTTGCTTTGTGCTTGCTTGTCTCAAGAACCCAATAGGATTTTGATTGTAGGCGTTTATGGGAGGCCTTGCCTGATCGGAACTCAGTGGAATGCATTTGGGATTGCATTTAGAAACGCTGCTGAGGAGATTGGAGCAGAGTTCTTCCATGAGTTGTTTGAGTCATCATGGATTCTTCTTGATTCTTCCACTGTAAATTCATTCATGATCAGGTTGACTGAGAAGCTATGA 522 0.4444 MFLVHPSNSGWLTMHCLLSNLDKLKARMQHAIRIQRAILRQGSTAITKNGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPNRILIVGVYGRPCLIGTQWNAFGIAFRNAAEEIGAEFFHELFESSWILLDSSTVNSFMIRLTEKL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2490 173 Pfam CDC45-like protein 19 172 IPR003874 GO:0006270
Amo17g2490 173 PANTHER CDC45-RELATED PROTEIN 18 173 IPR003874 GO:0006270
Amo17g2490 173 PANTHER - 18 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2490 Amo-Chr17 122384700 122385221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2490 18 173 Core DNA Replication Machinery Family AT3G25100 76.282 1.18e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2490 K06628 - jre:109013821 277.33