Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2489 ATGTGCAGGGAAGGCAATGAATTGGAAGAATCCGAAGAGGATTCGGATGAATCGGATGAGGAAGATAGCGAAAATAGCGACAATGATGAAGATGAACAGGGGTCTAGGAGAAAGAGGAGAAGGGTTTCGGATTCTGATCCGGTTCAGCTTTTTAAGAACCAGGTTAAGAAGTATTATAAGTTGGGGACTTTTCACGGGAAGCCTTCCGGGTGTTTGATGTATGAACTGGCTAATTCACTACGTAAGAACACCAATGAAGTGTTGTGGTTGTCTTGTGTGTCTCTTACTGACCAGTTTGTTCATGAGAGGTTGAGTGATGAGAGGTACCGTGACGGTGTGGCGGAGCTAGAGGACCGAATTAGATGTGCTGGGAACTTGGATGTGGTTACATCAGTTACTCTCAAGGATGGGACTAAGATACGGGCGCCACATTCGTGCAAGATTGCTTGTGAGGATGAGCTTAGGCTTATGTTGTTGAAGGAGTGGAGCTTGTTTGATTCAATGTTGTGCTCATTTACATTGCAACCAAGTTGA 534 0.4494 MCREGNELEESEEDSDESDEEDSENSDNDEDEQGSRRKRRRVSDSDPVQLFKNQVKKYYKLGTFHGKPSGCLMYELANSLRKNTNEVLWLSCVSLTDQFVHERLSDERYRDGVAELEDRIRCAGNLDVVTSVTLKDGTKIRAPHSCKIACEDELRLMLLKEWSLFDSMLCSFTLQPS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2489 177 Pfam CDC45-like protein 10 171 IPR003874 GO:0006270
Amo17g2489 177 MobiDBLite consensus disorder prediction 30 45 - -
Amo17g2489 177 PANTHER CDC45-RELATED PROTEIN 15 171 IPR003874 GO:0006270
Amo17g2489 177 PANTHER - 15 171 - -
Amo17g2489 177 MobiDBLite consensus disorder prediction 7 29 - -
Amo17g2489 177 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2489 Amo-Chr17 122383900 122384433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2489 38 171 Core DNA Replication Machinery Family AT3G25100 66.418 2.98e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2489 K06628 - mnt:21390434 218.394