Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2468 ATGGGTGAAGAAAAGGGTAAAATGGTCCATGATGATAAGTTTCTAAGAGATGCTCTATTCAATCTTTTTGTAGCTGGAAGAGATACCATAACTTGGGGTCTTACATGTTGCTACACACCCATTAGTGTGGACTTCTCAAATGCAGTGTTGGACCGTGTTAACTTTGGGAATGCGAATCTTGAAGGAGCTGTGTTTAAGAACACAGTGTTGTCAGGGTCTACTTTTGATGATGCTAAGCTGGAAGATGCAGTGTTTGAGGACACTATCATAGGTTACATTGATCTTCAGAAGCTATGCACAAATAAAACCATAAGTGATGAAGGCAGAGCTGAGCTTGGTTGTCGATCATGA 351 0.4074 MGEEKGKMVHDDKFLRDALFNLFVAGRDTITWGLTCCYTPISVDFSNAVLDRVNFGNANLEGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTISDEGRAELGCRS* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2468 116 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 43 115 - -
Amo17g2468 116 SUPERFAMILY Pentapeptide repeat-like 42 102 - -
Amo17g2468 116 Gene3D - 38 115 - -
Amo17g2468 116 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 43 115 IPR044195 -
Amo17g2468 116 Pfam Pentapeptide repeats (8 copies) 50 87 IPR001646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2468 Amo-Chr17 122011424 122011955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2468 - - mnt:21403787 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2468 17 122011424 122011955 Amo17g2468 17 122011424 122011955 ECH
Amo10g1749 10 62224180 62226747 Amo17g2468 17 122011424 122011955 hybridization
Amo08g0431 08 8330606 8331970 Amo17g2468 17 122011424 122011955 hybridization