Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2436 ATGGCTTCAGATCCAAAAATTCACAAGTTCGAAGAGGTGGCAAAGCACAATCAGACCAAAGATTGCTGGCTTATTATTAATGGAAAGGTCTACGATGTCACCCCTTTTATGGACGACCATCCTGGAGGTGATGAAGTTTTGTTATCTGCAACAGGGAAAGATGCAACCACCGATTTTGAGGATGTGGGGCACAGTGATTCTGCAAGAGACATGATGGACAAATACTACATAGGGGAGATTGATGCATCAACTGTCCCATTAAAGCGCACCTACATTCCACCCCAGCAAGCTAACTATAACCCTGACAAGACTCCAGAATTTGTGATCAAGATTTTGCAGTTCCTGGTTCCTCTCCTGATATTGGGCTTAGCCTTTGCTGTTAGGCACTACACCAAGAAAGATTAG 405 0.4395 MASDPKIHKFEEVAKHNQTKDCWLIINGKVYDVTPFMDDHPGGDEVLLSATGKDATTDFEDVGHSDSARDMMDKYYIGEIDASTVPLKRTYIPPQQANYNPDKTPEFVIKILQFLVPLLILGLAFAVRHYTKKD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2436 134 Gene3D - 1 86 IPR036400 -
Amo17g2436 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Amo17g2436 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Amo17g2436 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Amo17g2436 134 SMART Cyt_b5_2 8 81 IPR001199 -
Amo17g2436 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Amo17g2436 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Amo17g2436 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Amo17g2436 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Amo17g2436 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Amo17g2436 134 PANTHER CYTOCHROME B5 1 132 - -
Amo17g2436 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2436 Amo-Chr17 121248409 121250922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2436 1 134 NADPH P450 reductases AT5G53560 81.343 9.94e-83 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2436 K23490 - gmx:100305929 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2436 17 121248409 121250922 Amo17g2436 17 121248409 121250922 ECH
Amo08g0398 08 7708532 7710963 Amo17g2436 17 121248409 121250922 hybridization