Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2409 ATGAGGAGCAGTCGAGTAGTTAAGCGCATTTCAGAATGCCTCGTGAAGCCACACCTCCCAAACGAGGAATCAACGCAGTTGTGCCACTTAACTCCGTGGGATATTGTCCCCTTGTCCATTCATTATATCCAGAAAGGCCTTCTTTTCACGAAACCACAAAACCAGCCACAAGATTTCACCCATAATCTGTTGCATAATCTGAAAAATTCCCTCTCTCTTACCCTTCTCCATTTCTATCCACTTGCAGGCCGCCTTGTGACTCACCAAACCCAAGACCCTCCCTCTTATTCTGTCTCTCTTGATTGCATCAACTCTCCAGGAGCAAGATTCATCCATGCAATCTTAGACCTCACCGTATCCGATATCCTCTCTCCTGTCTATGTCCCCCCTACTGTTCACTCGTTCTTCGACCTCAACAAAGCAGTCAACCATGACGGTCACGCCATGCCTCTCTTGTCTGTCCAAGTCACTGAGCTAATCGATGGTGTTTTCATAGGCTGTTCCATGAACCACTGTGTCGCTGATGGCACTTCTTATTGGAGCTTCTTCAACACGTGGTCTGAGATATTTCAATCTCAAGCCAAAGGGGAAGATGTTAATGTTGTCAACATTTCTCACCGACCAATCCACAAGCGCTGGTTTCCAGAGTTAATTAATCTTCCCTTCAAACACCATGGCGAGTTTATCTGCAGATACGAAGCACCCAAGCTGAGAGAGAGGATCTTCCACTTCACAGCTGATTCTATCGCGAAACTCAAAGCCAAAGCCAACAAAGATTCCAGCACCAACGAAATCTCTTCGTTCCAGTCATTGTCAGCTCACGTTTGGAGAAGCATAACACGTGCTCGCAGCGTGCCGTGTGATCAAAGAAGCGGTTGCATAGTGGTTATAAACAACAGAACGAGAATGGAACCGCCTCTGCCGCAAGAGTACTTCGGAAACTCAGTTAACTCTGTGAGAGCGGTTACAACAGCAGGGGAGCTGAGTGAGCATGATCTGGGTTGGGCAGCGGGTAAGGTGCACGAAGCTGTTGCAAAATACAACCACAGAGTGGTGATGGATTGGCTCAACCAGTGGGTGCGATCCCCTGCTATTCATCAAACCGGTCGCTTCATTGATCCGTACAGTGTGGTGATGAGCAGTTCTCCAAGGTTCAATGTTTATGGGAATGAATTTGGAATGGGGAAAGCCGTGGCGGTTCTGAGTGGATATGCCAACAAGTTTGACGGCAAGGTGACGTCATATCCTGGCCGTGAAGGTGGGGGAAGCATTCAATTGGAAGTGTGTCTTTCTCCTCATACAATGAGCGCCTTGGAATCTGACCAACACTTCATGGATACGAAAAAGATCACATCCCCTGTTTCGGAATGCTTCGTGAAGCCACACCACAGCACGCAAGACTCAACACAACTGTGCCACCTAACACCATGGGATCTTGCCATGCTCTCCGTCCATTACATCCAAAAGGGACTTCTCTTCAAGAAGCCACAAAACCAACCTCAAAATTTCACCCAAAATCTATTGCACGATCTCAAACACTCACTCTCTCTTACCCTTATCCATTTCTATCCCTTGGCTGGTCGCCTTGTTACTCACCAAACCCAAGACCCTCCCTCTTATTCTGTCTCCGTTGACTGCGTCAACTCTCCCGGAGCAAAATTCATCCACGCAACGGTGGATCTCACCGTATCTGATATCCTCTCCCCCGTTGACGTCCCTCCGATTGTTCAGTCGTTCTTTGATCATGACAGAGCCGTCAGTCATGACGGCCACCACGTGTCCCTCTTAACCATCAAAGTCACTGAACTAATCGACGGCGTTTTTATTGGCTGCTCCATGAACCATTCCCTCGCTGATGGCACTTCTTACTGGAACTTCTTCAACGCTTGGTCTAAGATCTTTCAATCTCATTCTCAATCTAAATTCAAAGGGGAACAAGACGTTGATGTTGCCAACATTTCCCACAAGCCCATTCACAAGCGCTGGTTTCCACAGGGTTGTGGCCCAATAATCAATCTCCCATTCAAACACCATGACGAGTTTGTCTGTAGATTCGAAGCACCAAAACTCAGAGAGAGGATCTTCCACTTCAGTGCAGAATCCATTGCCAAGCTGAAAGCAAAGGCAAACCAGGAATCCAACACCACCAAGATCTCTTCATTCCAATCATTGTCAGCACTTGTTTGGAGATGCATCACTCGTGCTCGCAGATTACCGCATGATAGAAAGACGAGTTGCAAGCTGGCAATGAACAATCGAAGCAGAATGGAACCTCCTCTGCCTCCGGAATACTTTGGGAACGTACTTCATGCGGTGAGTGCAGCAATGACAGCAGGGGAATTGCTTGAACATGATCTGGGTTGGGCAGCGTGGAAGATCCACCTGGCTGTTGTGAACCATAATAATGGAGTGACGCTTGAGTTTCTCAAAGAGTGGTTAAAGTCTCCAGTGATCTATCAACATGCTCGGTTCTTTGAACCGGCTAGTGTGATGATGGGTAGTTCACCGAGATTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCGGTGGCGGTTCTGAGTGGATATGCTAATAAATTTGATGGGAAAGTAACGTCATACCCTGGCCGCGAAGGAGGTGGAAGCGTTGACTTGGAAATGTGTCTTTTTCCAGATTCAATGTGTGCGTTGGAATCTGACCAAGAGTTCATGAATGCGGTTTCTGTGTCTAATTAA 2718 0.4735 MRSSRVVKRISECLVKPHLPNEESTQLCHLTPWDIVPLSIHYIQKGLLFTKPQNQPQDFTHNLLHNLKNSLSLTLLHFYPLAGRLVTHQTQDPPSYSVSLDCINSPGARFIHAILDLTVSDILSPVYVPPTVHSFFDLNKAVNHDGHAMPLLSVQVTELIDGVFIGCSMNHCVADGTSYWSFFNTWSEIFQSQAKGEDVNVVNISHRPIHKRWFPELINLPFKHHGEFICRYEAPKLRERIFHFTADSIAKLKAKANKDSSTNEISSFQSLSAHVWRSITRARSVPCDQRSGCIVVINNRTRMEPPLPQEYFGNSVNSVRAVTTAGELSEHDLGWAAGKVHEAVAKYNHRVVMDWLNQWVRSPAIHQTGRFIDPYSVVMSSSPRFNVYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSIQLEVCLSPHTMSALESDQHFMDTKKITSPVSECFVKPHHSTQDSTQLCHLTPWDLAMLSVHYIQKGLLFKKPQNQPQNFTQNLLHDLKHSLSLTLIHFYPLAGRLVTHQTQDPPSYSVSVDCVNSPGAKFIHATVDLTVSDILSPVDVPPIVQSFFDHDRAVSHDGHHVSLLTIKVTELIDGVFIGCSMNHSLADGTSYWNFFNAWSKIFQSHSQSKFKGEQDVDVANISHKPIHKRWFPQGCGPIINLPFKHHDEFVCRFEAPKLRERIFHFSAESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARRLPHDRKTSCKLAMNNRSRMEPPLPPEYFGNVLHAVSAAMTAGELLEHDLGWAAWKIHLAVVNHNNGVTLEFLKEWLKSPVIYQHARFFEPASVMMGSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSVDLEMCLFPDSMCALESDQEFMNAVSVSN* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2409 905 Pfam Transferase family 8 444 - -
Amo17g2409 905 Pfam Transferase family 457 898 - -
Amo17g2409 905 Gene3D - 8 222 IPR023213 -
Amo17g2409 905 Gene3D - 454 670 IPR023213 -
Amo17g2409 905 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 448 - -
Amo17g2409 905 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 446 901 - -
Amo17g2409 905 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 448 - -
Amo17g2409 905 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 446 901 - -
Amo17g2409 905 Gene3D - 683 893 IPR023213 -
Amo17g2409 905 Gene3D - 231 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2409 Amo-Chr17 120232021 120237216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2409 511 892 Monolignol Biosynthesis Gene Families AT5G48930 26.420 8.02e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2409 - - dcr:108194865 920.613