Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2403 ATGGTGGTTCCCAACAAGAACAAGGAGAGCAGCCTCCTCTTAGGCCGCTTCGAGATAGGAAAGCTCCTGGGCTACGGAACCTTTACGAAGATGTACAACGCGCGCAACATCAAGACCGGTGAGGGCGTCGCCATCAAAATCATCGACAAGGAGAATATCCTCAAGAGCGGTATCGTCTCCCACATCAAAGGCGTCTTTCACCACGACCTCAAATCGGATAACCTCTTGCTCAATGAGAACGGCGACCTTAAGGTCTTCGATTTCGGCCTAAGTGTCGTTTTTTATCAAATTAGACAGGACGATTTGTTCCACACTTTTTGTGGAACTCCTGCTTACGTGGCACCTGAGGTTCTTTCCAGGAAGCGTTACGACACTACCAAGATTGATATTTGA 393 0.4835 MVVPNKNKESSLLLGRFEIGKLLGYGTFTKMYNARNIKTGEGVAIKIIDKENILKSGIVSHIKGVFHHDLKSDNLLLNENGDLKVFDFGLSVVFYQIRQDDLFHTFCGTPAYVAPEVLSRKRYDTTKIDI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2403 130 Pfam Protein kinase domain 61 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2403 130 SUPERFAMILY Protein kinase-like (PK-like) 11 130 IPR011009 -
Amo17g2403 130 SMART serkin_6 17 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2403 130 PANTHER - 60 130 - -
Amo17g2403 130 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 60 130 - -
Amo17g2403 130 Gene3D Transferase(Phosphotransferase) domain 1 63 130 - -
Amo17g2403 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2403 130 Gene3D Phosphorylase Kinase; domain 1 2 62 - -
Amo17g2403 130 PANTHER - 6 59 - -
Amo17g2403 130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 65 77 IPR008271 GO:0004672|GO:0006468
Amo17g2403 130 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2403 Amo-Chr17 119989311 119989914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2403 5 63 CBL-interacting serine-threonine protein kinases AT4G18700 59.322 1.34e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo17g2403 Pkinase 4.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2403 - - rcu:8275146 115.161