Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2376 TTTAAGCGCGCCCTCTCTCTTCCCATTGAAAATGTGACGTCCTCCGCTGTCGCCGCCGCCGCCGCCCGCGTCACACGAGCGCTCTCCGTCACCGCTCGTCGCATGAGCTCCCTCCACCGCCGCTCTCATCGCGTTTGTTCCCTTCGTCGCCATCGTCCCACGAGCTCTCTCTGTTGTGCTCTTGTCTTACGAGCTCCCTCCGCCGCCGCTCTCGTCACTGCTTCTTCTCTCATCGCCGGAGTTGAATACCAAAGAATACGATCGAGGAGAGCTCTTATGTTTGCAAATCAGCTGTTGCTGCTGCAGAGAACCTCCCAAGGTTCTGGTCCGAGGTTAATTGCGGTTTCAATTAGTTTTGATGGGATGCTTATATTTGCAATGATGCTTGGACTTGTTGTCTCTGATGCCATTTCTGGGAAGTTCGACTCAATGAGGAAAGGAAAAAGTGAGGTAGTTGAGCAAAATCATACTTCGATTCTTGGCTGGAGTGGAAAATTGGGTTCATTACTAAATCAACTTGCCATACCCAATGAGAGCCTGGGTGGAGGAACTGTTGTAGTGATGGCTGAGTCAGCTTCTACAAACAAGCCAACTCAGGTTTCTCCAACTTGCTTTCAAAGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACAGATCCAAGATCCCACCATACTTGACTGGAGAAGTGCCTGGAGGCTATGGTTATGATCCTTTTGGTCTCAGAAAGAAGCCAGAGGACTTTGCGAAGTATGTCAGCCATCCTTATGGTTATAATCATTCCCGAGGCCTTCAACAAATTCTGATTGTTTGTTACAATTTCTATACCACGCTTCCTGTTGCCAGATACATGGTGAGACAATTCGGCAGCTTCCACATTTACAAGAAAAGGCTCGGAAGCTTCTTGATATTCAGTGCAATGTGTGGCAGAGGGTAG 942 0.4904 FKRALSLPIENVTSSAVAAAAARVTRALSVTARRMSSLHRRSHRVCSLRRHRPTSSLCCALVLRAPSAAALVTASSLIAGVEYQRIRSRRALMFANQLLLLQRTSQGSGPRLIAVSISFDGMLIFAMMLGLVVSDAISGKFDSMRKGKSEVVEQNHTSILGWSGKLGSLLNQLAIPNESLGGGTVVVMAESASTNKPTQVSPTCFQSPDRRIFLPEGLLDRSKIPPYLTGEVPGGYGYDPFGLRKKPEDFAKYVSHPYGYNHSRGLQQILIVCYNFYTTLPVARYMVRQFGSFHIYKKRLGSFLIFSAMCGRG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2376 313 Gene3D Chlorophyll a/b binding protein domain 212 256 - -
Amo17g2376 313 PANTHER ION CHANNEL CASTOR-RELATED 104 193 - -
Amo17g2376 313 SUPERFAMILY Chlorophyll a-b binding protein 223 254 - -
Amo17g2376 313 PANTHER ION CHANNEL POLLUX-RELATED 104 193 IPR044849 GO:0006811
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2376 Amo-Chr17 119639365 119642140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2376 205 253 Chloroplast and Mitochondria Gene Families AT4G10340 77.551 2.46e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2376 K21866 - ini:109183535 142.51