Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2373 ATGCACCAGCAGAACTTGAAGGACTTCTCATATCCGGATGACGAGGCTAGTGAGGTTTCAATTGCCTTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAGATGTTCAGAAATTGCGAAGGGTGACATTCATCAACGGTGTTCCTAAGACAGCTTCAGAAAAAATACTCAGAAAAGACCTCATAGCAAAAATATGA 201 0.4179 MHQQNLKDFSYPDDEASEVSIAFVVRSPNTSLTEQDVQKLRRVTFINGVPKTASEKILRKDLIAKI* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2373 66 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 64 - -
Amo17g2373 66 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 10 64 - -
Amo17g2373 66 SUPERFAMILY Acetyl-CoA synthetase-like 10 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2373 Amo-Chr17 119503258 119503689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2373 11 66 Monolignol Biosynthesis Gene Families AT4G05160 55.224 9.46e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2373 K01904 - gmx:100808944 80.8777