Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2366 ATGAATTGTTTCTCTATAAGTAACCCTTTGGGGCTTCTCAAGTTGTTATTTTCACCTTGTAATAAAATGCATGTCTTGGAATGTTTCCTCTTATTGTTGTCTCTCTTCATCCTCTCACCTTCTGATGCTTTTTCCAGCGATGAAGCTTCTTTCATTGCACGTCGCCAATTGTTAACCCTTGAGGAGAACGCTGATTTACCCGACGATTGGGTGGATAATTACCAAATTAACCTAACCTTCGATAATCCTAGACTCAAGAGTGCCTACATTGCCCTTGAAGCATGGAAGCATGCTATCTATTCTGACCCATCAAACTTCACATCTAATTGGGTGGGCCCTGATGTTTGCTCTTACAATGGAGTTTATTGTGCTCCAGCGCTTGATGACCCTTCGATTCAAGTTGTGGCTGGCATTGATCTTAACCATGCAGATATTGCAGGCTACATCCCTTCAGAGATTGGGTTGTTAACTGATCTTGCACTTTTGCACATAAACTCTAACAGGTTTTGTGGCATTCTCCCAAAAAGCTTCTCCAAGTTAAAGCTCTTGTATGAGATTGATATCAGCAACAACCGTTTTGTGGGTCCATTTCCAAACCCTGTTCTCTCCATATCTTCTCTTCATTACCTTGATCTTAGGTTTAATGACTTCGAAGGCGAGGTTCCATCGGAGCTTTTCAATATTACATTAGATGCAATCTTCTTGAACAACAATAGGTTCACATCTGCGATTCCGGAGAGCATTGGAAGCTCTCTGGCCTCTGTGATTGTATTGGCCAACAACCACTTTCAGGGATGCATTCCTGCAAGTATTGGTTCGATGGACAATACATTGAATGAGTTTGTTGTGACGAACAACAAGCTTACGGGGTGCTTGCCCCCGGAGATTGGAAAGCTTAGCCACATGGAGGTGTTTGACATTAGTAAGAACAACTTGGTTGGTGTGTTGCCAAGGACATTGATGGGATTGAAGGAAGTGACAGTGTTGTCGATTGCAGACAACAAGCTTACCGGTTTTGTGCCAAAAAGCATATGTGAGTTGGAGAACTTGAAGAACTTTACGTTCTCGAACAACTATTTCAACGGTGAGGAAGAGGGTTGTAACCCTAAAACAAGAAAGGGGATCAAGTTGGATGATCAAAAGAATTGCATACCAGAAAGGCCAAAACAGAGGGATGGAAGCGCTTGTAATGCTGTCATAAGCAAGCCTGTTGATTGTAGCAAGGCACAGTGTGAGAAACCAATGCCAATAACACCATCACCAAATAATCCTTCTAAACCTTCAAAAGAGAAACCAACTCCAACGCCCTCCTCACATAATAACAAGAAACCACAACCTACACCTTCTCCAAATGAAAAGAAAACACCGTCGTCGCCAAAGCCAACTCCTTCTCCAACTAAGAAGCCAACATCAACACCACAGACTTCAACACCGTCAAATCCAAAACCACCTAAAGCACCTAAGCATGATGATGATTATGATGATCATTATGAAGAACCTAAAGAACGAAATAGGCCTCCAAAATCTCCACCTCCATCTCCAGCTCCAGTAGTACATTTTCCTCCTCCTCCACCAGTCTACTCTCCACCACCTCCACCAATCCATTCTCCACCACCACCTCCAATTCACTCCCCACCACCACCCATCAACTCTCCACCACCACCTATCTACTCTCCTCCTCCACCAGTTCTCTCCTCGCCACCGCCTATCTACTCTCCTCCACTAGTAGTGCAATCCCCACCACCACCCATTTATTCTCCTCCTCCACCGGTTTTATCCCCACCACTCCCACCACCAATCTACTCTCCTCCACCACCTGTTAACTTTCCTCCTCCACCGGTATATTCTCCCCCACCACCAATCTACTCTCCTCCACCACCCACCTACTCTCCTCCTCCTCCTGTTGTTTATGCACCACCACCCCAAGAAGATGATATCGTTATTCCACATGACTTTGGTTCTTCATATGCTTCTCCTCCGCCACCAATTATCTCTGGCTACTAA 2004 0.4471 MNCFSISNPLGLLKLLFSPCNKMHVLECFLLLLSLFILSPSDAFSSDEASFIARRQLLTLEENADLPDDWVDNYQINLTFDNPRLKSAYIALEAWKHAIYSDPSNFTSNWVGPDVCSYNGVYCAPALDDPSIQVVAGIDLNHADIAGYIPSEIGLLTDLALLHINSNRFCGILPKSFSKLKLLYEIDISNNRFVGPFPNPVLSISSLHYLDLRFNDFEGEVPSELFNITLDAIFLNNNRFTSAIPESIGSSLASVIVLANNHFQGCIPASIGSMDNTLNEFVVTNNKLTGCLPPEIGKLSHMEVFDISKNNLVGVLPRTLMGLKEVTVLSIADNKLTGFVPKSICELENLKNFTFSNNYFNGEEEGCNPKTRKGIKLDDQKNCIPERPKQRDGSACNAVISKPVDCSKAQCEKPMPITPSPNNPSKPSKEKPTPTPSSHNNKKPQPTPSPNEKKTPSSPKPTPSPTKKPTSTPQTSTPSNPKPPKAPKHDDDYDDHYEEPKERNRPPKSPPPSPAPVVHFPPPPPVYSPPPPPIHSPPPPPIHSPPPPINSPPPPIYSPPPPVLSSPPPIYSPPLVVQSPPPPIYSPPPPVLSPPLPPPIYSPPPPVNFPPPPVYSPPPPIYSPPPPTYSPPPPVVYAPPPQEDDIVIPHDFGSSYASPPPPIISGY* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2366 667 MobiDBLite consensus disorder prediction 484 506 - -
Amo17g2366 667 MobiDBLite consensus disorder prediction 439 468 - -
Amo17g2366 667 Gene3D Ribonuclease Inhibitor 88 386 IPR032675 -
Amo17g2366 667 MobiDBLite consensus disorder prediction 507 588 - -
Amo17g2366 667 MobiDBLite consensus disorder prediction 633 667 - -
Amo17g2366 667 SUPERFAMILY L domain-like 90 364 - -
Amo17g2366 667 Pfam Leucine rich repeat 301 359 IPR001611 GO:0005515
Amo17g2366 667 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 24 574 - -
Amo17g2366 667 MobiDBLite consensus disorder prediction 417 431 - -
Amo17g2366 667 PRINTS Proline rich extensin signature 412 424 - -
Amo17g2366 667 PRINTS Proline rich extensin signature 496 521 - -
Amo17g2366 667 PRINTS Proline rich extensin signature 470 487 - -
Amo17g2366 667 PRINTS Proline rich extensin signature 450 466 - -
Amo17g2366 667 PRINTS Proline rich extensin signature 427 448 - -
Amo17g2366 667 MobiDBLite consensus disorder prediction 410 588 - -
Amo17g2366 667 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2366 Amo-Chr17 119311785 119313788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2366 43 475 Trihelix Transcription Factor Family AT4G33970 57.241 1.15e-164 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2366 - - ahf:112705802 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0377 08 7316594 7318531 Amo17g2366 17 119311785 119313788 hybridization