Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2343 ATGATAACATTGGACTGGTATAACCTTGAGAAGTTGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCGAAGGCATCTGCTGCTAATTCGAATAAGAAGGCGGTGAAGTATGCTCGCAGGGAGGATGCTAGTTCTGGAAAAGCACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCTTGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTTCCAGGTATTGTATTTGCAAGAGGACCTGCTGTGACTGTGTTGATACTTCTGGAATCAGATGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGAGACTGGCATAAAGTTCAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGACAGTAGACTATAAGAGACCAACCTATGAAGAAGTTGAGAACCTCCAAGCCTTACTTCCAAGGGAGTGCAATATCTGCCAAATGCAAATCGGCGAAATGGCTAGTATTGGAATGGATAACTTGAACCCTTAA 870 0.446 MITLDWYNLEKLKQVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDASSGKAPTIKAPRLPPLAVDPYTRYGPKAEITHLFRTPESKVAVEGRVQFDLLQVSFTGSMEVGREIMLAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVPGIVFARGPAVTVLILLESDGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGTAETGIKFKLEDMVDLTAFLDSSTGCRFFPSPTVDYKRPTYEEVENLQALLPRECNICQMQIGEMASIGMDNLNP* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2343 289 Pfam Aldehyde dehydrogenase family 103 157 IPR015590 GO:0016491
Amo17g2343 289 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 92 156 IPR016162 GO:0016491
Amo17g2343 289 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 158 247 - -
Amo17g2343 289 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 157 247 - -
Amo17g2343 289 SUPERFAMILY ALDH-like 104 157 IPR016161 GO:0016491
Amo17g2343 289 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 158 247 - -
Amo17g2343 289 SUPERFAMILY Nudix 162 220 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2343 Amo-Chr17 118586725 118590895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2343 98 156 Aldehyde Dehydrogenase Gene Family AT3G24503 74.576 4.89e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2343 K18447 - ahf:112775503 307.76