Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2341 ATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGCATTCTTTTCTTCCTCTTTCACACCCTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGAGATTGGGATTCTAGCTGATGGCACCTTGGCTCTGAGACAAGTTCTAATTCAGGTTCCAAGTATTGTATTTGCAAGAGGACCTGCTGTGACTGTGTTGATACTTCTGGAATCAGAAGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTGAAGAGGAGACTGGCATAAAGTTCAAACTTGAAGACATAGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCG 537 0.4227 MHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIAFFSSSFTPCRNAIDSSLFKQWLHNLQSEIGILADGTLALRQVLIQVPSIVFARGPAVTVLILLESEGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGTAVEEETGIKFKLEDIVDLTAFLDSSTGCRFFPSP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2341 179 Pfam NUDIX domain 95 169 IPR000086 -
Amo17g2341 179 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 44 87 - -
Amo17g2341 179 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 87 179 - -
Amo17g2341 179 Pfam Aldehyde dehydrogenase family 3 45 IPR015590 GO:0016491
Amo17g2341 179 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 44 87 - -
Amo17g2341 179 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 87 179 - -
Amo17g2341 179 SUPERFAMILY ALDH-like 1 46 IPR016161 GO:0016491
Amo17g2341 179 SUPERFAMILY Nudix 90 157 IPR015797 -
Amo17g2341 179 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 50 IPR016162 GO:0016491
Amo17g2341 179 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 70 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2341 Amo-Chr17 118557960 118559611 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2341 1 43 Aldehyde Dehydrogenase Gene Family AT3G24503 76.744 8.45e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2341 K18447 - gmx:100818255 194.512