Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2338 CGCCGTCTTCGTCGTCTTCTGATTACAGTGCCATCTCCTGAGGTCTTGTTGCCGTCATCTTCTGAGATCTCGGCATCATCGCCTTCATCTTTGAGATCTCGGCGGCGTTGGCCTCATCTGAGTTTGCAAATCGTCTCATCACCGTCCAGATCTGACTTTCTCATTGTCATGCCGTTCTTTTCTCACCGTCGCCTCCTCTGGTCGTTGCTTTCTGATTTCGAATCACTTCCATTTCTTTCTTTTGTTGAAGATTCAGATTTCAGAGGCAACCACCATCACCACGAAAGTCCCAAGGCCTCCACCTTGCGCCCTTTGACGTGCATTCGCAACACCCTTGACGCCGCTATGTGCCTCCAGGCATTGGTTGAGTCATTGGACTTTATAATTGACACAGCATCTGGTAATCACCCTTTTGATCCTTACATGTTTCTTCTAAAAACATGTGGTGTCTTAGTCTTAGTTGGGGCTCCAAGTGAAATCAAAATTAAGCCCAGGAAGCCTTATTGGTGCAATGAAACTTTAAATGTGCATTATTTATGGTTTACAGGGATGAGAAGCATTTTCGGAAGTGCTACAGGAGGCATGAAAGATACCCAAGAGATGATTGATTTGTGTGCTGAAAAGGAGATTTATCCAAATATAGAAGTGATTCCCATTGAATATGCTAATGAAGCTTTTGAAAGGATCATAAACAAAGATGTCAAGTATAGGTATGTGATAGACATTGAAATTTTCCTCAAGTAA 744 0.4315 RRLRRLLITVPSPEVLLPSSSEISASSPSSLRSRRRWPHLSLQIVSSPSRSDFLIVMPFFSHRRLLWSLLSDFESLPFLSFVEDSDFRGNHHHHESPKASTLRPLTCIRNTLDAAMCLQALVESLDFIIDTASGNHPFDPYMFLLKTCGVLVLVGAPSEIKIKPRKPYWCNETLNVHYLWFTGMRSIFGSATGGMKDTQEMIDLCAEKEIYPNIEVIPIEYANEAFERIINKDVKYRYVIDIEIFLK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2338 247 Pfam Zinc-binding dehydrogenase 110 229 - -
Amo17g2338 247 Gene3D - 118 212 - -
Amo17g2338 247 PANTHER ALDEHYDE REDUCTASE 118 246 - -
Amo17g2338 247 Gene3D - 213 242 - -
Amo17g2338 247 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 210 IPR036291 -
Amo17g2338 247 PANTHER - 118 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2338 Amo-Chr17 118507933 118509923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2338 118 247 Monolignol Biosynthesis Gene Families AT1G72680 57.692 6.12e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2338 K00083 - egr:104444157 160.614