Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2334 ATGAACAGTCACGTGATGTTATCGGAGGTGAAAACCGCAATGAACGATAGTTACAATAATAGCAACAACAAGAGTATGGCGGTTACGGAGATGGATAAATGGTTTGGCGAGATTAGCCTAAACGTGTTGTTCAGGTTGGTGGTGGGAAAGCGTTTCACCGGTCACAGTGAAGAGAACGAACGAATCCGGAAAGCCCTGAGGGATTTCTTTGATCTCGGTGCATCGTTTGTGGTTGCTGATTCGATTCCGTGGTTGAGATGGTTGGATTTGGATGGGGGAGAGAAGGCCATGAAGAAAACGGCGAAAGAGTTGGATGAATTTGTTCAGACCTGGTTAGAAGAACACAGACTTAGCAGAAATCATGGCGCAGAGCGTGATTACATGGACAAGCTTATTTCCAGTTTCCATCAAGGCTTTGACGGTCACGACGTTGATACTCTAATCAAAGCTACATGCCTGACATTAATTTTGGCTGGTACAGACACCACGACAGGGACACTTGGTTGGGCTCTTGCTTTACTTTTGAATAATCGCCAAATTCTAAATAAAGCTGTTCATGAATTAGACACACATATAGGAACTAATAGAATGGTGATAGAAACGGATCTAAACAATCTTGTGTATCTTCAAGCCATTGTCAAAGAAACATTCCGCTTGTACCCGCCTGTGGTGCTCAGTTTGCCTCACGAATCCATGGATGATTGTGTGGTGGGTGGATACCATATCCCTGCTGGCACACAACTTTGGACAAATATTTCAAAAATGCAACGAGATCCTGCTTTATATCCTGATCCATTAGAGTTTCGACCGGAGAGATTTCTGACAACTCACAAAGACATTGAACTTAAGGGTCAGCACTTTGAATTGATTCCATTTGGTGCAGGAAGAAGAATGTGTCCTGGAATGTCATTTGGTCTTCAAATGGTGCAGTTAACACTTGCTAATGTGCTGCATGGGTTTGACATTGTAATAGCCGATGGAAAACCAGTTGATATGGTTGAACGTGTTGGGATAACCAGTGTCAAAGCCAATCCGCTCAAAGTAATTCTTACACCACGTCTCTCTACCCAAGCTTATGTTTAA 1083 0.4312 MNSHVMLSEVKTAMNDSYNNSNNKSMAVTEMDKWFGEISLNVLFRLVVGKRFTGHSEENERIRKALRDFFDLGASFVVADSIPWLRWLDLDGGEKAMKKTAKELDEFVQTWLEEHRLSRNHGAERDYMDKLISSFHQGFDGHDVDTLIKATCLTLILAGTDTTTGTLGWALALLLNNRQILNKAVHELDTHIGTNRMVIETDLNNLVYLQAIVKETFRLYPPVVLSLPHESMDDCVVGGYHIPAGTQLWTNISKMQRDPALYPDPLEFRPERFLTTHKDIELKGQHFELIPFGAGRRMCPGMSFGLQMVQLTLANVLHGFDIVIADGKPVDMVERVGITSVKANPLKVILTPRLSTQAYV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2334 360 PRINTS P450 superfamily signature 158 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS P450 superfamily signature 211 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS P450 superfamily signature 290 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PANTHER CYTOCHROME P450 82C3-RELATED 2 359 - -
Amo17g2334 360 SUPERFAMILY Cytochrome P450 6 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 Pfam Cytochrome P450 22 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 292 301 IPR017972 GO:0005506|GO:0016705
Amo17g2334 360 Gene3D Cytochrome P450 2 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PANTHER CYTOCHROME P450 2 359 - -
Amo17g2334 360 PRINTS E-class P450 group I signature 38 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 147 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 167 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 251 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 289 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2334 360 PRINTS E-class P450 group I signature 299 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2334 Amo-Chr17 118387965 118389766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2334 1 360 Cytochrome P450 AT4G31940 44.211 4.14e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2334 - - gmx:100787630 483.411