Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2329 AAGTCCCAAACCAAAATCTTAGGTTCTTTGTCGCCACGGTCTCGTCAATGTAAGCAATTCCGTCGTCGTCTCTGTCAACTACCGCCGTTCACTGGAGCACCGCTTTCCCTGCACCTACGAGGACGGCTGGACCGCTCTGGAGTGGGTCAGATCGAGAAAATGGCTCCGGAGCGGAAGATCCGAATCGGAATCAAAAGTGGAAACATAGTTCACCACGTGGCAGTGAGAGCGGCGGAGGCGGGAATCGAGGTTCTCGGTAACATCCTTCTTTATCTACTGTTCGGTGGAGAGAAGAGGACTGAGTCAGAGATAAGGCTTGATGGAAAGTATTTCGTGAATCTTCAGGATCAAGATTGGTATTGGCGGGCTTTTCTTCTTGAAGGAGAAGATAGAGACCACTCTGCTTGTAACCCATTTGGGCCAAGGGATTTTGGTTGGACATTTTCAGGGCAGCGGCAAAGAACTTAG 468 0.5021 KSQTKILGSLSPRSRQCKQFRRRLCQLPPFTGAPLSLHLRGRLDRSGVGQIEKMAPERKIRIGIKSGNIVHHVAVRAAEAGIEVLGNILLYLLFGGEKRTESEIRLDGKYFVNLQDQDWYWRAFLLEGEDRDHSACNPFGPRDFGWTFSGQRQRT* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2329 155 Pfam alpha/beta hydrolase fold 67 139 IPR013094 GO:0016787
Amo17g2329 155 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 66 144 - -
Amo17g2329 155 Gene3D alpha/beta hydrolase 66 150 IPR029058 -
Amo17g2329 155 PANTHER ARYLACETAMIDE DEACETYLASE 66 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2329 Amo-Chr17 117864990 117865488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2329 67 142 Carbohydrate Esterase AT3G63010 72.368 2.93e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2329 K14493 - lja:Lj1g3v4404340.1 142.124