Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2328 ATGAATATCTCATTTCAGTTAACCATTGTTGCTATTCTGTTATCATTTATATGCTACGCATTTTTGAGCAAGAGAAAGAACAAAGAAAGCGGCAAAGAGGCTCCTGTCCCGAATGGTGCATGGCCAATAATTGGCCATCTACACCTTCTAGGCAGCCACGACCAGCTACTTTACAGAACGCTCGGCAGAATGGCAGATCAATACGGGCCAGCCTTTAATATCTGGCTTGGCAGTCGTCGAGCATTCGTGGTGAGTAGCTGGGAAGTAGCAAAAGAATGCTTCACAACAAATGACAAAGCACTTGCCTCACGTCCCACCACGGTGGCCGCAAAACACATGGGATACAACTATGCAGTGTTCGGTTTTGCGCCTTACAGCGCCTTCTGGCGCGAGATGAGAAAGATTGCGACTCTTGAACTTCTCTCCAACCGCAGGCTTGAAATGCTCAAGCACGTTAGAATCTCCGAGCTCAACATAGGAATAAGGGACCTTTACAACTCTTGGGTTCAGAACAATTCAAATCCTGTGGTTGTTGAACTTAACCGATGGCTGGAGGATTTGTCTCTAAACACGGTGGTTAGAATGGTGGCGGGGAAACGCTACTTTGGCGCCTCTGCTAAGTGTGGTGATGACGAGGCAAGGCGATGCCAGAAAGCTATTAACCAATTCTTTCATCTGATAGGGATATTTGTTGTTTCAGATGCTGTTCCATTTCTGCGTTGGTTGGATGTGCAGGGGCATGAGAAAGCAATGAAGAAGACGGCTAAGGAGTTAGATGAGATACTTGATGGGTGGTTGCAGGAGCATCGAAAGAGTAGGGTTCATGGAGAAGAAGATGATCGAGACTTCATTGATGTCATGTTGTCCCTCCAAGAAGGTGGTCACCTTTCAAATTTCCAATACGATTCCGACACAAGTATCAAATCAACTTGCCTTGCACTTATACTTGGAGGGAGTGATACCACAGCTGGGACACTTACCTGGGCAATCTCTTTGCTTCTCAATAATCCTGACGCATTAAGAAAGGCACAAGAAGAATTGGACCTGCATGTTGGTAAGGAAAGGCAAGTTGAGGACTCAGATATTAGAAATCTTAGATATATTGAAGCCATTATTAAGGAAACCCTGAGGCTCTACCCAGCTGGTCCACTCCTAGGACCAAGAGAAGCCCAAGAAGATTGCACCGTTGCTGGTTATCATGTGCCAGCTGGCACACGGTTGGTGGTTAACTTGTGGAAGATTCATAGGGATCCAAGGGTTTGGAAAGACCCTTGTTCATTTCAACCGGAGAGGTTTCTCACAAGCCATCATGCAGCTATTGATGTTAGAGGTCAAAACTTTGAACTTATTCCTTTTGGATCTGGGAGAAGATCATGTCCTGGCATGTCGTTTGCGCTCCAAGTTCTTCACTTGACGCTTGCTCGTCTGCTTCATGCATTTGATTTTGCAACTATCTCCAACGAGCCAGTTGATATGACTGAGAGTCCAGGTTTAACCATTCCTAAGGCAACTCCACTGGAGATTCTCATTACTCCCCGTCTTCAACCACAACTATATGGCTAG 1563 0.4581 MNISFQLTIVAILLSFICYAFLSKRKNKESGKEAPVPNGAWPIIGHLHLLGSHDQLLYRTLGRMADQYGPAFNIWLGSRRAFVVSSWEVAKECFTTNDKALASRPTTVAAKHMGYNYAVFGFAPYSAFWREMRKIATLELLSNRRLEMLKHVRISELNIGIRDLYNSWVQNNSNPVVVELNRWLEDLSLNTVVRMVAGKRYFGASAKCGDDEARRCQKAINQFFHLIGIFVVSDAVPFLRWLDVQGHEKAMKKTAKELDEILDGWLQEHRKSRVHGEEDDRDFIDVMLSLQEGGHLSNFQYDSDTSIKSTCLALILGGSDTTAGTLTWAISLLLNNPDALRKAQEELDLHVGKERQVEDSDIRNLRYIEAIIKETLRLYPAGPLLGPREAQEDCTVAGYHVPAGTRLVVNLWKIHRDPRVWKDPCSFQPERFLTSHHAAIDVRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFDFATISNEPVDMTESPGLTIPKATPLEILITPRLQPQLYG* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2328 520 Pfam Cytochrome P450 37 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PANTHER STEROID 21-HYDROXYLASE-RELATED 7 516 - -
Amo17g2328 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Amo17g2328 520 Gene3D Cytochrome P450 20 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2328 520 PANTHER CYTOCHROME P450 CYP82D47-LIKE 7 516 - -
Amo17g2328 520 SUPERFAMILY Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2328 Amo-Chr17 117861749 117863760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2328 34 519 Cytochrome P450 AT4G31940 69.106 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2328 K23136 - gmx:100811993 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2328 17 117861749 117863760 Amo17g2328 17 117861749 117863760 ECH
Amo08g0367 08 7202755 7205386 Amo17g2328 17 117861749 117863760 hybridization