Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2324 ATGGGTGAAGAAAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGTCTGTAAACTGGACTTGATATTCAACTTCTATAAGTCTGAACCTCAAGATATTGAAATAGATGATCAGCAAGATGGTGAGGTTAATACTCTCAATATCAGCAGTTTAAGGCTACTGCTTCATCACCAGTCTGCAGTTGATGCTGATCAATTGGAAGAGTCTGTGACATCTCTATCAAATTTGGATGATTCTGATTCTTCTAAATATCTAGTTCGGAAGAAGGTTCAAGAATCCTTGGAAAACTTAAAGGAGGAGGCAGTTGTTCCTAAAAGGTCCATTCGATGGGAACTTGGTTCCAGTTGGATACAGCATCTGCAGAAACAGGAAATATTAAAAGATAATATTTCCAAAAAAGATAGTGGCAATGAAACTGCACAAAATATTAAAGCATTGGCAGGGATCCATATCTGGAAGAACTTTCAGAGCTACTCATTGGTAGTAAATTCAATTTTGACAAAGTCAAATCTTATCTTGTGCCTCATTTTTCAATGGAAATCGAAGTTTTACGGATTCGACAAGAAAGGGAACCGGTGGAAGGAGAGAACCGCAGGTACCGTCAAGTTCCCGAAGAACAAGGTTACTAGCAAGGACTTACCAACTGAATCTGGAACTGTGATCCCCTATGTTCACTTGATGAAACAAGCTCACAAGATTTTGAGGACAGTTATAAGCCCAAGACTGATTTGCTCAAAGCTGTTGCGTGTTTGCATTTGGGAATATGTTTACAAGTCTGTGACCATGACTGCAGGATCTTACCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCATATTTTAGGAATCTCTAGCTTTCAACAAAAGTGGAGTAGGACTTTTGATGGCTGTAAGCTTGTGGACTATAAGAAGTATTGGGCTGTTTCTGAGCTAACGCTTGCGTCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTAAGACTATTGTGGAAATAGTTGATGCTCATCAAGGATTTAAGCTAGTTACTGACAATATAACAACTCGAAAGCCACAACTTCTCTTTTGGGTGGCCTTTATGTTGGATTCAGAGTATGAAGCTCATGTTTTAGATTTTGGGACTGCTAAGTTTTTCAAGCCTGTTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATGTAATGAGACAAAGATAA 1260 0.3857 MGEENKVVGEGEKKKEVCKLDLIFNFYKSEPQDIEIDDQQDGEVNTLNISSLRLLLHHQSAVDADQLEESVTSLSNLDDSDSSKYLVRKKVQESLENLKEEAVVPKRSIRWELGSSWIQHLQKQEILKDNISKKDSGNETAQNIKALAGIHIWKNFQSYSLVVNSILTKSNLILCLIFQWKSKFYGFDKKGNRWKERTAGTVKFPKNKVTSKDLPTESGTVIPYVHLMKQAHKILRTVISPRLICSKLLRVCIWEYVYKSVTMTAGSYHGIAICNRICRHHILGISSFQQKWSRTFDGCKLVDYKKYWAVSELTLASAEVSEIVFFLLGAKTIVEIVDAHQGFKLVTDNITTRKPQLLFWVAFMLDSEYEAHVLDFGTAKFFKPVIKKRMEKDIDEVGKIAHGVKTKIEAINRDVMRQR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2324 419 Gene3D - 176 275 IPR011993 -
Amo17g2324 419 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 20 147 - -
Amo17g2324 419 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 20 147 IPR027523 GO:0006996
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2324 Amo-Chr17 117778437 117782618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2324 309 361 Antiporters AT3G19490 83.019 1.37e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2324 - K03255 aip:107629530 134.035