Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2318 ATGACGATTGAGTATGAAGAAGCAGTAGCAGCAGCAGTTGTTGGTATACTAATCATATCATACTACTTGTACTTCATCAAAACTGCACGTGACGACGATGCTTGCAAGCCACAACCACCGCCGGAGGCGGCCGGTGGCTGGCCACTAATCGGCCACCTGAAAATCTTTAGTGGTTCCGATCAGCCACCTTATGTTACCCTGGGAACCATGGCAGACAAGTACGGACCAATATTCAGAATACGAATCGGCGTGCACCCTGCCATAGTTGTGAGTTCTTCAGAGCTAGCCAAAGAGTTATTCACGACGCACGATGCCATAATTTCTTCTCGTCCAAAATATACCGCCGCAAAAATCCTAGGACAAAACTATGCCAATTTCGGTTTCTGTGCCTACGACAATTACTGGCGCGAGATGCGAAAGATAACAGCCTCGGAGTTACTCTCCACTCGCCGGTTCGAGTTGCTTCGCGATATCAGAGATTCAGAGGTGGGGTATTCAATGAAAGAGATATACAGAACGTGGTTGGAGGAAAGAGAAGGCTCTAGAGGGTTGTTATTGGAGATGAATAAGTGGCTGGGAGATATGAACCTGAACGTGATTCTGARGATGGTTGCGGGGAAGAGGTACTCAGCGAAGGGTGGCGATGAGCGGCAGGTGAGGCGGATCAGGTTGGCGTTCAGGGAGTTCTTTCGTCTTACCGGAGTGACGGTTGTTGGGGATGCGATTCCTGCTCTTAGGTGGTTTGATTTTGGTGGTAAAATAAAGGAGATGGAGAAGGCGGCTAAGGAAATGGACGAGATAGTTAGTGAGTGGATTGAAGAACATCGAGAGAACAAAGACTCTGGAGTGGCAAAAACAGAACAGGATTTTATTGATGTGTTGCTTTCTGTCCTTGATGGGGTTGATCTTGCTGGCTTTGATGCTGACACTGTGAACAAAGCTACTTGCTTGACGCTAATTGCAGGGGCAACGGACACAACAACAGTTACCATGACATGGACACTTTCGTTATTACTGAACAATCGCCACGTTTTGAAGAAGGTTCAAGATGAACTAGACGAGCAAGTAGGCAAGGAGAGACTAGTGAAGGAATCAGATATTAACAAACTAAAATACCTTGAAGCTGTGGTCAAAGAATCACTGCGATTGTACCCGGCTGGGCCACTATCAGGGCTTCGTATATTCACAGAGGACTGTACCTTAGGGGGTTACCATATCAAACAAGGCACACGATTGTTCTTGAATCTTTGGAAGCTTCACAGGGATCCTCGCGTATGGTCAAACCCACTGGAATTCAAGCCGGAGAGGTTCATAAGCACGCACAGCGATGTGGATGTGAAGGGTCAGCATTTTGAGCTTCTTCCGTTTGGCGGTGGAAGAAGGTCGTGTCCTGGCATAACATTTGGGCTTCAAATGACGAAGTTGGCGTTAGCTGCATTCTTGCATGCATTTGAGATCACAACTCCCTCAGATGCTCCTGTTGATATGAGTGCTACGTATGGACTCACAATCATCAAAACCACACCGCTTGAAGTTTTCGCCAAACCTCGTTTATCCCCTTCTGTTTTATCATTAAACACCCTTGCATGA 1590 0.4692 MTIEYEEAVAAAVVGILIISYYLYFIKTARDDDACKPQPPPEAAGGWPLIGHLKIFSGSDQPPYVTLGTMADKYGPIFRIRIGVHPAIVVSSSELAKELFTTHDAIISSRPKYTAAKILGQNYANFGFCAYDNYWREMRKITASELLSTRRFELLRDIRDSEVGYSMKEIYRTWLEEREGSRGLLLEMNKWLGDMNLNVILXMVAGKRYSAKGGDERQVRRIRLAFREFFRLTGVTVVGDAIPALRWFDFGGKIKEMEKAAKEMDEIVSEWIEEHRENKDSGVAKTEQDFIDVLLSVLDGVDLAGFDADTVNKATCLTLIAGATDTTTVTMTWTLSLLLNNRHVLKKVQDELDEQVGKERLVKESDINKLKYLEAVVKESLRLYPAGPLSGLRIFTEDCTLGGYHIKQGTRLFLNLWKLHRDPRVWSNPLEFKPERFISTHSDVDVKGQHFELLPFGGGRRSCPGITFGLQMTKLALAAFLHAFEITTPSDAPVDMSATYGLTIIKTTPLEVFAKPRLSPSVLSLNTLA* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2318 529 Coils Coil 254 274 - -
Amo17g2318 529 Gene3D Cytochrome P450 35 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 522 - -
Amo17g2318 529 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 Pfam Cytochrome P450 44 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2318 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Amo17g2318 529 PANTHER CYTOCHROME P450 82C3-RELATED 12 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2318 Amo-Chr17 117586844 117589295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2318 14 518 Cytochrome P450 AT4G31940 47.276 7.40e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2318 - - gmx:100810391 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2318 17 117586844 117589295 Amo17g2318 17 117586844 117589295 ECH