Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2316 ATGGCTTCTGTGGCTCCTTCAGTTCTGAGTTGCTTAAGCATTACCAATAATCTAGTGATGATTGCTCTCGTTTTTCTAATCTTAGTTGTTCCGCTATTCTTTCTTTTGCGAAGCTCTAAAGTCGCCCGCCGCCGAGGAGGCAAAGAGCCACCACTGGCGGCGGGGGCATGGCCCATAATAGGCCATCTCTGGCTCTTCACCCGTTCCCAGCCACCACAGATAACTCTAGGCGCCATGGCCGACAAATACGGAGCCATATTCAGGATCAAGATCGGACCACAACGTGCTGTGGTCATCAACAACTGGAAAACCGCTAAGGAATGCTTCACCACCAACGACATCGCCCTGTCATCGCGGCCAAGGGTCGTTGCCGTCGAACACCTTACCTATAACCAAGCCATGGTGTCCTTCGCCCCTTATGGCCATTATTGGCGCGAGATGCGAAGGATTGCCAACCAGGAATTGCTCTCTACTCGCCGAATCGAGTTATCAAGCCACCTTCGTGTCTCCGAGTTAGAAGCCAGCATCAAAGCGCTCTACAAAGTCTGGGCTGAGAAACACAACAACAACAACGACAACGATGACGCCTCCTCGGGCTATGTTGCGGTGGAGATGAAGAAGTGGTTTGGAGAGTTGATGCTCAATATGGTTCTTAGAGTGGTTGCGGGAAAACGATATTTTGGTGGTTCTGATGAGGAGGAAGCACGGCGGTTCTTGAAAACCATGAGAGAATTCATGCGGCAGTTGGGGTTGGTTGTGGTGGGTGACGCTGTTCCCTGGCTTCGGTGGCTGGATTTGGGTGGGCACGAGAAATCCATGAAAGAGACCGCTAAGGAGATGGACGCCATTATGATGGAGTGGTTAGAGGAGCATCGCCGGAAAAGAGCTAATTCTGATCAGGATGGTGGGGATCAAGATTTCATGGACGTCATGCTCTCAATTCTTGATGGTACTCAACTTGCTGGATTTGATTCCGATACTATCATCAAAGCCACCACTTGGATTCTGATGGGAGGATCGATTGACACCACTTCAGGAACTCTTATATGGATATTATCTTGTATGTTGAACAATACAGGCACAATAGAACAAGCACAAAAGGAGTTGAACATCTATGTTGGTAAAGAAAGACTTGTAAAAGAAACCGACATAAGTAAGTTGGTGTACATTCAAGCCATCGTTAAAGAGACATTAAGGCTATACCCTACAGCAATTTTCTCAGGACCTCGTGAGTTTGCGGATGACTGCTTTGTTAATGGCTACTACATTCCAAAAGGAACGCAACTAATCACAAATTTATGGAAGATTCACACGGATCCTAGCATTTGGTCAGACCCATTAGAATTTAAGCCAGAGAGGTTCCTTACCACTCACAAAGATGTTGATGTTAGAGGTAACCACTTTGAGTTGATCCCATTTGGAAGTGGGAGAAGAATGTGTCCCGGACTATCATTTGCCCTTCCCATGATTCATCTAACTTTGGCTACTTTCTTGCAATCCTTTGAAATTTCAAAGCCATCTGATGAACCCATTGATATGACGGAAATATTTGGCCTCACAACTATGAAAGCTACTCCCCTTGATGTTCTCATCAAGCCACGTCTTTCTTCTAGGCTCTACAGTTTATCTTGA 1632 0.4651 MASVAPSVLSCLSITNNLVMIALVFLILVVPLFFLLRSSKVARRRGGKEPPLAAGAWPIIGHLWLFTRSQPPQITLGAMADKYGAIFRIKIGPQRAVVINNWKTAKECFTTNDIALSSRPRVVAVEHLTYNQAMVSFAPYGHYWREMRRIANQELLSTRRIELSSHLRVSELEASIKALYKVWAEKHNNNNDNDDASSGYVAVEMKKWFGELMLNMVLRVVAGKRYFGGSDEEEARRFLKTMREFMRQLGLVVVGDAVPWLRWLDLGGHEKSMKETAKEMDAIMMEWLEEHRRKRANSDQDGGDQDFMDVMLSILDGTQLAGFDSDTIIKATTWILMGGSIDTTSGTLIWILSCMLNNTGTIEQAQKELNIYVGKERLVKETDISKLVYIQAIVKETLRLYPTAIFSGPREFADDCFVNGYYIPKGTQLITNLWKIHTDPSIWSDPLEFKPERFLTTHKDVDVRGNHFELIPFGSGRRMCPGLSFALPMIHLTLATFLQSFEISKPSDEPIDMTEIFGLTTMKATPLDVLIKPRLSSRLYSLS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2316 543 Pfam Cytochrome P450 54 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 SUPERFAMILY Cytochrome P450 56 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PANTHER CYTOCHROME P450 82C3-RELATED 17 540 - -
Amo17g2316 543 PANTHER CYTOCHROME P450 82A2 17 540 - -
Amo17g2316 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Amo17g2316 543 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2316 543 Gene3D Cytochrome P450 39 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2316 Amo-Chr17 117573138 117575334 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2316 51 540 Cytochrome P450 AT4G31940 47.400 2.16e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2316 - - qsu:112023929 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2316 17 117573138 117575334 Amo17g2316 17 117573138 117575334 ECH