Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2309 ATGATCATCATCACAAAGCACACAATTTTGATCCTTCTAGTGTTATGCTGTCTCTTCCTCTCTCTAAGCACAGCACAAGTAAACTACCGAACGTGCAACCAAACATGCGGTTCATCCAAACCCTACCCTTACCCTTTCGGATTCTCCTCCGACTGCGGAATCCGCCTCAATTGTACCACCGACGGCGGAATCTTGATCGGTAAATTCCCAGTCCAAGAAGTAACAACGGACAGCATAATCGTCGGCATCAAAGCACAGTGCAATCGCCCATTTTATACATTCCACGAACTCTTCAGCCACAAGTACGCTCCCACATCGGGGAACGTGATCTTCGTGCAGAACTGCTCCAAAACGGCGTCGTCTTGCACCGTTCCGGAGGCTATGGTGCGGGAATACTTTGACTACTCTGAGGATTGCAGAGAGGGAAGYAGCTTGAGCTGCTACTTCGAAAACAACAGCACCAACAAGTTCTTGAATAAGAGCATCTTGGATGGGTACGGCTGTGGCAACTTTATGTCTTCCATCTGTTCGGAAAATTTGAGGAACAATTCCGGTGCTCCGGTGTCGTTGGAGGTAGCCACAATTCAGCTTGGTTGGTGGCTTCAGGGAGCTTGCCAGTGTTCTAGTGATGCTAATTGTACCGAAATTGAGTCCCCCGTTGATCGGAAACCCGGCTTCCGGTGTACCTGCAAGGAAGGCTTTGTCGGCGATGGCTTTCTTGCCGGAACAGGCTGTACGAAAATCAGAGCCTCTTCAGCATGCAACGCAGCCAAGTACATGTCTGGCCGATGTGGAGGAACTGCGAGATTTGTCATCTTGATTGCAGGATTTGCTGTAGGAGTTTCAGTGATGATAAGTGCGGTTTCAGTATTTTGTTGTTTGTTTAAAAGGCGCAGCAAATTGAGAGTCACAAAGAGCACAAAAAGGCGGTTCACCGAAGCAACCGTCAACTACAGCGTCCCTATCTATCCCTACAAAGACATAGAGAGAGCCACCAACAGTTTCTCTGAGAAACAACGCCTGGGAACCGGTGCATACGGTACAGTTTACGCGGGAAAACTTCACAACAATGATGAATTGGTTGCMATCAAGAGAATAAAACAGAGGGACGCCAACGACAGCATCGAGCAAGTAATGAACGAGATCAAGCTCCTCTCTTCAGTCAGCCACACTAACTTAGTGCGATTGTTGGGTTGCTWCATAGAACACGGAGAACAGATCCTGGTCTATGAGTTCATGCCGAACGGAACATTGAGTCAGCATCTTCAAAAAGAACGAGGAGACGGTCTTTCATGGCCGATTCGATTAAGAATTGCCACCGAAACAGCACAAGCCATTGCACATCTTCACTCTGCCATGAATCCCCCAATCTATCATAGAGATATCAAATCCAGCAACATACTCTTGGATTCCAATTTCGGTTCAAAGGTAGCTGATTTCGGTCTCTCTAGACTTGGAATGACTGAAATATCCCACATTTCAACGGCGCCACAGGGGACCCCTGGCTATGTTGATCCGCAGTACCATCAAGACTTTCATCTTTCTGACAAGAGTGATGTTTACAGCTTCGGCGTTGTTCTTGTTGAGATCATAACTGGACTCAAGGTGGTTGACTTTACCCGCCCTCATAATGAAGTGAACCTGGCCTCCCTTGCAACTGATAGGATCGGGAACGGGCTCTTGGACGAGATCATAGACCCCTTTCTCGTGCCTCAAGCAAGAAGTGATCCTTGGACACTTTCCTCAATACACAAGGTTGCTGAGTTGGCATTTAGATGCCTTGCATTCCATAGAGATATGAGGCCTTCAATGACAGAAGTGGCAAGCGAGTTAGAACAACTCACGCTTACTACGTGCCCTAGTTTTGGTGACAATCATAATTCTGTAGCTTCTACAGAGTTATCCGCTTCTTCTTCCTCCTCCTCCTCCTCTAATGAGAGTGAGAAACCACTTAGCAGTAGAACCAAGGTCGGGCTACTAACTGGGCCCAAGTTAAGGTCGTTGTTGGATAGGACCAAAAGTAGCTCACCGGTTTCGGTGCAAGATAGAGAAGTATGGTTGAGTGAACAAAGCTCTCCCTCGTCAAATAGTTTCCCTAGCAAGTCATTTGATTGA 2115 0.4728 MIIITKHTILILLVLCCLFLSLSTAQVNYRTCNQTCGSSKPYPYPFGFSSDCGIRLNCTTDGGILIGKFPVQEVTTDSIIVGIKAQCNRPFYTFHELFSHKYAPTSGNVIFVQNCSKTASSCTVPEAMVREYFDYSEDCREGSSLSCYFENNSTNKFLNKSILDGYGCGNFMSSICSENLRNNSGAPVSLEVATIQLGWWLQGACQCSSDANCTEIESPVDRKPGFRCTCKEGFVGDGFLAGTGCTKIRASSACNAAKYMSGRCGGTARFVILIAGFAVGVSVMISAVSVFCCLFKRRSKLRVTKSTKRRFTEATVNYSVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLHNNDELVAIKRIKQRDANDSIEQVMNEIKLLSSVSHTNLVRLLGCXIEHGEQILVYEFMPNGTLSQHLQKERGDGLSWPIRLRIATETAQAIAHLHSAMNPPIYHRDIKSSNILLDSNFGSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPHNEVNLASLATDRIGNGLLDEIIDPFLVPQARSDPWTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLTLTTCPSFGDNHNSVASTELSASSSSSSSSNESEKPLSSRTKVGLLTGPKLRSLLDRTKSSSPVSVQDREVWLSEQSSPSSNSFPSKSFD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2309 704 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 24 645 - -
Amo17g2309 704 Gene3D Laminin 205 241 - -
Amo17g2309 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Amo17g2309 704 Gene3D Phosphorylase Kinase; domain 1 296 412 - -
Amo17g2309 704 CDD STKc_IRAK 341 614 - -
Amo17g2309 704 MobiDBLite consensus disorder prediction 627 704 - -
Amo17g2309 704 MobiDBLite consensus disorder prediction 627 654 - -
Amo17g2309 704 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 645 IPR045274 GO:0007166
Amo17g2309 704 Pfam Protein kinase domain 335 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2309 704 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2309 704 MobiDBLite consensus disorder prediction 668 704 - -
Amo17g2309 704 SUPERFAMILY Protein kinase-like (PK-like) 311 612 IPR011009 -
Amo17g2309 704 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Amo17g2309 704 SMART serkin_6 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2309 704 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2309 Amo-Chr17 117250135 117256590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2309 1 698 Receptor kinase-like Gene Family AT2G23450 50.212 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo17g2309 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2309 - - mtr:MTR_3g111510 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2309 17 117250135 117256590 Amo17g2309 17 117250135 117256590 ECH