Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2293 ATGGATAATACTATTGTTCTCTTCACACTAAGCTTTCTTCTTGTATCTTCAAATGGCATCATGTCACAGCAGAATTATTCAGGAAACTCAGTACTAAATTGCAGCAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCWCTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCASAGAACATGATGATGATTATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAACAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATMCTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGGTAGCGGCACCAAGTATTTSCTGACCTACTCGGTTAATTGGGGTGATAACRTCTCTAATATCGCARCACRGTTCCATGTCAACGCAAGTAGTATGGTTGATGCCAATGGTTTMTCCTCAGAAAATGAAATGCTMTATCCATTCACAAYTGTCCTSATTCCATTAACAAGTGAACCCAACAGCACAATAACCAAAGTTCAAAATGGTCAACCACCTTCTCCAACTACTCTTTACACTGTAAGAAAGGATAAGAAAAAGACAAAAAGAAAAAGAATCATAGTTGCTCTTACTTCCTCGGCGAGCTTCTTGTTTTTTCTGTTTGTCGTTTTATCTCTAGTGTTTGTGCGTAGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAGAGGCAGAACAAAGCAAGTGTTTTCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAAGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGARGGAAATCATGGCGATCAAGAAGATGAATTTGGGTGCCTCTAARGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGGTTACTGTGAAAAAGATGGATCCTTCTATCTTGTTTTTGAGTACATGGAAAATGGTTGTTTGAGAGAATGGCTTGGGAGAAGAAACAGAACCAYAGAACACCAATGTTGGAGAAAGAGGATTCGRATTGCTGTGGATRTTGCAAATGGACTTGAGTATCTTCATAACTTCACAGATCCTTGCTATGTTCACAAGGCCATAAACACTGAYAATATATTGCTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTCTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCCCATGTTGTGGGAACCAGGGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGATGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACCGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAATCTCATTGACAAAGATGATGCAGAAGAGAAACTCGGTTTGTTCATTGATCCTAGTCTCGTGGGAAACWGTSAGAAGGTCTATGCAATTCAGCTAGTTAASCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCAGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGACAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGGTGA 1941 0.4101 MDNTIVLFTLSFLLVSSNGIMSQQNYSGNSVLNCSNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNAXHSTLFRTGKEVIVPLNCSCPTXEHDDDYDEYYQAQTTYVLPKDPTYFTTANDTFQGLTTCDSLQRYNXYGVLDLHPGMVLHVPLRCACPTARQAGSGTKYXLTYSVNWGDNXSNIAXXFHVNASSMVDANGXSSENEMLYPFTXVLIPLTSEPNSTITKVQNGQPPSPTTLYTVRKDKKKTKRKRIIVALTSSASFLFFLFVVLSLVFVRRKRLEIFFRGDRRGRTKQVFSEQIREGLASIELLSKVYKFDEIKEATENFSASNRIKGSVYRGVFGKEXEIMAIKKMNLGASKEVNLLGRINHFNLIKLEGYCEKDGSFYLVFEYMENGCLREWLGRRNRTXEHQCWRKRIRIAVDXANGLEYLHNFTDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLGLFIDPSLVGNXXKVYAIQLVXLSLACLVEEPSRRPNMAEVVSSLLRIYTEIETRTSPCRINDSGSTER* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2293 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 633 - -
Amo17g2293 646 SUPERFAMILY Protein kinase-like (PK-like) 332 622 IPR011009 -
Amo17g2293 646 Pfam LysM domain 197 241 IPR018392 -
Amo17g2293 646 Gene3D Phosphorylase Kinase; domain 1 317 418 - -
Amo17g2293 646 Pfam Protein kinase domain 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2293 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 4 633 - -
Amo17g2293 646 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2293 646 Gene3D Transferase(Phosphotransferase) domain 1 419 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2293 Amo-Chr17 116686303 116688411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2293 10 625 Receptor kinase-like Gene Family AT2G23770 36.967 3.22e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo17g2293 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2293 - - aip:107641252 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2293 17 116686303 116688411 Amo17g2293 17 116686303 116688411 ECH