Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2256 ATGTGTCGTTCAAAAGACCCTTCCGCTTTCCCAGGAAACCCTGTAGTTCCTGCAATATACCGTCTTTCTCCGGTGAACCCTAAAGAGCATGACGTTGGATACCCTTCAAGCCTGTTAGTACCTCCTCCGCCACCCTCCTCACCGGAACACAGGGGTAGTAAGGTCACTTCAAGAATCATGTCCTTACGCCAAATGTGCCGTGACGACCACCGCGACAAGCAAGTAAACACCAGAGGCAGAAGAAGCACATCCAGCGTTCCTTCCAGGAGAAGCAACGTGGCGGTTGACAACGAAGAAGAAAGCGAGTCTCTAATTTCTTGCACCACAAGTTTCTCGGACGATTCTTATTCTCTCAAACCGGAGAGAGATTTAGTTAGCAGCAGCAGTGGCAGCAGGAGGCACATGAGGAGGATAAGCAGCGTGAAGAAGGTTCAGAGAATGAGGTTCAACACTGCGAGATTAGAACTACCGGAAACAGAACAAGTAAAGAAGACAAAGACAAAGACGAAGACGAAGGTTGTGTCGACGGCATCAACCACAAGGATGAGGCGGAGCAGCGCGGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCGAAGGATCCGTATGAGGACTTCAAGAGATCAATGGTGGAGATGATAAGGGAGATGGAGATGCGTGATGCAGAGGATTTGCAGCAACTGCTTCAGTGTTTCTTGGCTCTGAACTCCAGGTGCTATCACGATGTGATTGTGCGTGCTTTCATGGAGATATGGCAAGAGATGTTCGTTATGAAGCCTGCGTCCTCCAACACCAACGATATTCTCCAAAGAGATCAATTGCAACTAGGAGAGTAA 843 0.4935 MCRSKDPSAFPGNPVVPAIYRLSPVNPKEHDVGYPSSLLVPPPPPSSPEHRGSKVTSRIMSLRQMCRDDHRDKQVNTRGRRSTSSVPSRRSNVAVDNEEESESLISCTTSFSDDSYSLKPERDLVSSSSGSRRHMRRISSVKKVQRMRFNTARLELPETEQVKKTKTKTKTKVVSTASTTRMRRSSAEGKVRESFAVVKKSKDPYEDFKRSMVEMIREMEMRDAEDLQQLLQCFLALNSRCYHDVIVRAFMEIWQEMFVMKPASSNTNDILQRDQLQLGE* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2256 280 PANTHER TRANSCRIPTION REPRESSOR OFP7 45 261 - -
Amo17g2256 280 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 261 IPR038933 GO:0045892
Amo17g2256 280 MobiDBLite consensus disorder prediction 79 115 - -
Amo17g2256 280 Pfam Transcriptional repressor, ovate 201 258 IPR006458 -
Amo17g2256 280 MobiDBLite consensus disorder prediction 116 130 - -
Amo17g2256 280 MobiDBLite consensus disorder prediction 63 78 - -
Amo17g2256 280 MobiDBLite consensus disorder prediction 25 137 - -
Amo17g2256 280 ProSiteProfiles OVATE domain profile. 197 256 IPR006458 -
Amo17g2256 280 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 195 257 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2256 Amo-Chr17 115730951 115731793 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo17g2256 Ovate 8.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2256 - - aip:107608440 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2256 17 115730951 115731793 Amo17g2256 17 115730951 115731793 ECH
Amo08g0020 08 704758 705624 Amo17g2256 17 115730951 115731793 hybridization