Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2233 ATGATCTCTCAAATGGTAAAGCTTGAAAATGGATACACTAGTTGTTACTGTTGTGCGGCTCTCTTCTTGTTACTGCTATTATTATCATGGCATTGGAGCAGAAACAAGAAGACCGGTGACGGGATCCCTCCGGGTAACGGAGGATTGCCATTTGTGGGAGAGACACTGCAGTTCATGGCTGCCATCAAYAGCACCAAAGGAGTATATGAATTTGTCCGACTCCGCCACCTCTGGCATGGCAGTTGCTTCAAGACCAACTTGTTCGGAGAAACACATGTTTTTGTTTCTAGCACAGATTCAGCCAAAGCRATTCTAAACAACGAGGGAGGCAGATTCTCAAAGAGGTACATAAAATCTATATCAGAGCTTTTGGGACACCATAGCTTGCTCTGTGCTGATCACCACCATCACAAGCTCATTCGTGGCCGTCTCCTCACTCTGTTCTCAACGGATGCTTTGTCCTCCTTTGTTCAAATGTTCGATGTCCTCAATGGCTATGAACTAGTGATCATGCAGAAGAGCATTGCTCATTTATGTGAAGCAATGCTTGCATTACCCTTGAGGTTGCCATGGACTAGATTCTCCAATGGCCTACAGGCTCGGAAAACAATTATGGAAATATTGGAGAAGGAGATTAGTGAAAGAAGAAGTGGAATAAGAAGAACTAATGAWAAAGTAGATTTTCTCCAACAACTTATAGAAGAAGATGATGATAACAAATTAAAWGATGAAGAGATCAAAGACAACATCTTAACTATGATGATTGCAGGACAGGACACAATCGCTAATGCAATGACATGGATGGTCAAATTTGTGGACGAGAATCAAGAGGTCCTTAACACGCTTAAGAAGGAGCAACTACAAATTGAGAAAAATGGCAGAACAAGAAGGGATAATCTTACATTAGAGGATCTCAATGAGATGCAATATGCTTCTAAGGTTGTGACAGAAGCGTTAAGGATGGCATCTGTGGTACAGTGGCTTCCCAGGGTAGCACTCCAAGATTGTGAGATTCAAGGATTTAAAATCAAGAAAGGGTGGAACGTTGATATTGATGCTAAATTCATACACTTTGATCCAACTATATACAATGATCCACATGTATTCAATCCTTCTAGATTTGCTGRTGAGTTTAAACCATACAGCTTCCTAGCTTTTGGGATGGGAGGAAGGACGTGCCTTGGGAAGAACATGGCTAGAGCCATGATGCTGGTGTTCCTCCACCGTCTCATCACCACTTACAAGTGGAAGGTGATTGATTCAGACTCAAGTATTCAGAAATGGGCGCTTTTCTCAAAGCTCAAGAGTGGCTGTCCTGTTCGTTTGACATCTCTGAAACAGCACTCAAACTAA 1353 0.4205 MISQMVKLENGYTSCYCCAALFLLLLLLSWHWSRNKKTGDGIPPGNGGLPFVGETLQFMAAINSTKGVYEFVRLRHLWHGSCFKTNLFGETHVFVSSTDSAKAILNNEGGRFSKRYIKSISELLGHHSLLCADHHHHKLIRGRLLTLFSTDALSSFVQMFDVLNGYELVIMQKSIAHLCEAMLALPLRLPWTRFSNGLQARKTIMEILEKEISERRSGIRRTNXKVDFLQQLIEEDDDNKLXDEEIKDNILTMMIAGQDTIANAMTWMVKFVDENQEVLNTLKKEQLQIEKNGRTRRDNLTLEDLNEMQYASKVVTEALRMASVVQWLPRVALQDCEIQGFKIKKGWNVDIDAKFIHFDPTIYNDPHVFNPSRFAXEFKPYSFLAFGMGGRTCLGKNMARAMMLVFLHRLITTYKWKVIDSDSSIQKWALFSKLKSGCPVRLTSLKQHSN* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2233 450 PANTHER CYTOCHROME P450 26 22 164 - -
Amo17g2233 450 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PANTHER CYTOCHROME P450 26 166 445 - -
Amo17g2233 450 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 166 445 - -
Amo17g2233 450 Coils Coil 225 239 - -
Amo17g2233 450 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Amo17g2233 450 Coils Coil 219 223 - -
Amo17g2233 450 Gene3D Cytochrome P450 33 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 SUPERFAMILY Cytochrome P450 38 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 Pfam Cytochrome P450 185 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 Pfam Cytochrome P450 43 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2233 450 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 22 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2233 Amo-Chr17 114779707 114781990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2233 15 416 Cytochrome P450 AT1G19630 54.402 3.17e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2233 - - lang:109327951 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2233 17 114779707 114781990 Amo17g2233 17 114779707 114781990 ECH
Amo08g0095 08 1919451 1921813 Amo17g2233 17 114779707 114781990 hybridization