Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2228 ATGGCATCGAGTAGTTTGCGGAGTGTTTCAAGCCTTCTATGTGCAGAGGACAACAACAGCGTCTTCGACGAAAATGATTACGGCGGTGGTTCGGTGTTGTCGGCGGACACGTGGCATCATCCTAGGCATCAAAACCGTGAGGAGTTACTCTGGCAAGTGCCACAAGCTGTTAGCGAAGAGCTCACAAATGGGGATTTGGATTTTGGGGCCAGAAATCATGCCATTCATTGGATTCAAAAGAAGCAAAGGGTTTGGACAGTGCAATTGTTGGCTGTGGCTTGCTTATCTCTTGCAACCAAAATAAATGAGACTGATCCTCCTCTTTGCCTTGATTTGCAGGTTTTGCTTGTGGTGAATAATTTTTTACCCCTTCAGGTTGGTGAATTAAAATTTGTATTTGAAGCAAAAACAATCCAAAGAATGGAGCTTTTGGTACTTAGCACATTGAGATGGAGAATGCAATCAATTACCCCTTTCTCCTTCATTGACTATTTCCTTTACAAGGTCAATGATGATCAAAATCCAACAAGAGATTCAATTATGAGATCCATCCAACTTATACTGAGTACTGTAAAAGGGATTGAATGCTTGGAGTTTAGACCATCAGAGATTGCAGCTGCTRTAGCAATAGTTGTGGTAAGGGAAACAAAAACAGTGCACACTGAGAAAGCAATTTCTCTTCTGAATCACCTAGTGGAAAAGGAGAGAGTGTTGAAATGTGTGAAATTAATCCGAGGGTTGTCATCAAAGGATGGTTTTACTAATAAGGACACAAGAAGTGGTTCTGTTTCTGCCCCTTTGATGCCACAAAGTCCAATTGGGGTGTTGGATGGTGTGTGCTTAAGCTACAAAAGTGAGGACACTAATGCTGCTGCTTCGTATGCAAACATTAATTCATCTTCACATAATACTAAATACGGGAAAAAGGAGGATGTTGTATATGGAAGCAAGGATAGTAGATGA 963 0.4123 MASSSLRSVSSLLCAEDNNSVFDENDYGGGSVLSADTWHHPRHQNREELLWQVPQAVSEELTNGDLDFGARNHAIHWIQKKQRVWTVQLLAVACLSLATKINETDPPLCLDLQVLLVVNNFLPLQVGELKFVFEAKTIQRMELLVLSTLRWRMQSITPFSFIDYFLYKVNDDQNPTRDSIMRSIQLILSTVKGIECLEFRPSEIAAAXAIVVVRETKTVHTEKAISLLNHLVEKERVLKCVKLIRGLSSKDGFTNKDTRSGSVSAPLMPQSPIGVLDGVCLSYKSEDTNAAASYANINSSSHNTKYGKKEDVVYGSKDSR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2228 320 MobiDBLite consensus disorder prediction 300 320 - -
Amo17g2228 320 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 81 313 - -
Amo17g2228 320 SUPERFAMILY Cyclin-like 47 153 IPR036915 -
Amo17g2228 320 SMART Cyclin_C_2 156 271 IPR004367 -
Amo17g2228 320 Pfam Cyclin, N-terminal domain 86 153 IPR006671 -
Amo17g2228 320 Pfam Cyclin, C-terminal domain 156 250 IPR004367 -
Amo17g2228 320 SUPERFAMILY Cyclin-like 138 243 IPR036915 -
Amo17g2228 320 PANTHER CYCLINS 81 313 IPR039361 -
Amo17g2228 320 Gene3D - 149 303 - -
Amo17g2228 320 MobiDBLite consensus disorder prediction 304 320 - -
Amo17g2228 320 CDD CYCLIN 85 146 IPR013763 -
Amo17g2228 320 Gene3D - 67 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2228 Amo-Chr17 114432377 114436280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2228 61 287 Core Cell Cycle Gene Families AT2G22490 42.692 3.20e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2228 K18810 - gmx:100803873 300.441