Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2219 ATGTCAGGGGCAAAGAGAGAACAAAATCGACATACCAACATCAACATAATCCAACACGAACCTTTACCTATGGCTTCTAATGACAACAATGAACGGAAAAAAATATTTCATTGGACTTTACAAGAGCACAAGTTGTTTCTCCAAGGGTTTGAAGAATTAGGAAAACAATGGTTAAGAATTTCAAATGAATATGTTAAAACAAGAACTTATACACAAGTTGAACTATAA 228 0.3289 MSGAKREQNRHTNINIIQHEPLPMASNDNNERKKIFHWTLQEHKLFLQGFEELGKQWLRISNEYVKTRTYTQVEL* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2219 75 SUPERFAMILY Homeodomain-like 37 73 IPR009057 -
Amo17g2219 75 Gene3D - 38 75 - -
Amo17g2219 75 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 22 73 - -
Amo17g2219 75 MobiDBLite consensus disorder prediction 1 25 - -
Amo17g2219 75 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 75 IPR017930 -
Amo17g2219 75 CDD SANT 38 73 IPR001005 -
Amo17g2219 75 ProSiteProfiles SANT domain profile. 38 75 IPR017884 -
Amo17g2219 75 PANTHER F25A4.19 PROTEIN 22 73 - -
Amo17g2219 75 MobiDBLite consensus disorder prediction 1 28 - -
Amo17g2219 75 Pfam Myb-like DNA-binding domain 38 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2219 Amo-Chr17 113555877 113556412 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo17g2219 Myb_DNA-binding 8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2219 - - ahf:112708481 79.3369