Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2195 ATGATGAATGAAGGATGCCTTCCCACGATGGATCTGCTACGATCGGAGCCTATGCAGCTAGTTCAGTTGATCATTCCCATCGAAGCAGCTCATCGATCCATCTCTTACCTCGGTGATCTCGGCCTCGTTCAATTCAAAGATCTAAATGCAGATAAAAGCCCGTTCCAACGGACATATGCTACTCAGATTAAAAGGTGCGGGGAAATGGCTCGCACGCTACGGTTATTTAAGGAACAAATGACAAAGGCGGGTGTATCTCCCTCGATGCAGAATACCAGAAATAGTGTTATTGATCTGGATCATTTGGAGGTTAAACTTAAAGAACTTGAAGCTGATCTGCTTGAGAATAAGGCAAATAATGAGAAGTTGCAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGGTTGGTGAATTTTTCTCTTTAGCACAAAACATTGCTGTAGCTCAGCAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGCGTTTTCGGCTAAGCAGGTTAAGCTGGGTTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATTCCTTTTGAAAGAATCTTGTTTCGTGCTACAAGGGGGAATGTATTTATGAAGCAAGCCGTGATTGATAAACCTGTGCTCGATCCAATATCAGGAGAGAAGGTTGATAAAAATGTATTTGTTGTATTTTATTCTGGGGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGCTATCCTTTCTCAGATGACCTGGGGAAACAATTTCAGATGATAAGAGAGGTGTCAGGGAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAACACTTTACTCCAGTCTATTGGACATCAGTATGAGCAGTGGAGCCTTCTGTTGAGGAGGGAAAAAGCCGTTTATCACACCCTAAATATGCTTAGCTTTAATGTGACGAGAAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGATTCAGAAAGTATTGCAGCGGGCAACTAGGGATTGTAACTCCCAGGTTGGAGCCATATTTCAGGTTCTCCAGACAAAGGAATCACCGCCGACTTATTTTTACACAAACAAATTTACTTCTTCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCAGGAGGCAAATCCAGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTGTCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACCTCATAATCAGAGAGAAAAAGTATTCGAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGGACGCTATGTTATTGCGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTGTTCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGAAACACCTACCCATTTGGTCTGGATCCTGTATGGCATGGCAGTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAGATGAAAATGTCTATTTTACTGGGAGTATGCCAGATGAATCTTGGAATCATATTGAGTTATTTTAATGCAAAATACTTTGGAAGCAGCATAGATGTTTGGCACCAATTTGTTCCCCAGATGATATTCTTAAATAGCCTATTCGGCTACCTTTCGCTCATCATAATTGTTAAATGGTTTACTGGATCACAGGCTGACTTATATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAGAAGTTTCTTCAACTTGGATTATTGTTGTCAGCACTTGTAGCTGTACCATGGATGTTATTACCAAAGCCCTTTCTTCTGAAGAAACAACACGAAGAAAGGCATCAAGGTCAATCTTACTCTCTGGTCCACAGTACGGATGATCCTATTGAATCAGGGCCACATAGCCCTCACGGCCATGAGGGGTTTGAGTTCAGTGAAGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGTGCTGTGTCTAATACAGCTTCATATCTACGTCTATGGGCCCTCAGTCTGGCTCATTCAGAGTTGTCGAGTGTCTTCTATGACAAAGTTCTACTTATGGCCTGGGAGTTTAATAATACCGTTATTCTTATTGTTGGCGTTATTGTTTTCATATGTGCAACTGTTGGTGTATTACTGCTTATGGAAACTCTAAGCGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTTCAGAATAAATTTTATGTGGGAGATGGTTACAAGTTTGCCCCATTTTCATTTGCGTTACTTAGTGATGAGGATGAACTGTAG 2454 0.4112 MMNEGCLPTMDLLRSEPMQLVQLIIPIEAAHRSISYLGDLGLVQFKDLNADKSPFQRTYATQIKRCGEMARTLRLFKEQMTKAGVSPSMQNTRNSVIDLDHLEVKLKELEADLLENKANNEKLQHTYNELVEYKLVLEKVGEFFSLAQNIAVAQQREHDVQTTVKGSIDSPLLLEQETTAFSAKQVKLGFISGLVPREKSIPFERILFRATRGNVFMKQAVIDKPVLDPISGEKVDKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIREVSGKLSELKTTIDVGLLHWNTLLQSIGHQYEQWSLLLRREKAVYHTLNMLSFNVTRKCLLAEGWCPVFATSQIQKVLQRATRDCNSQVGAIFQVLQTKESPPTYFYTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICILLASLYLIIREKKYSSQKLGDIMQMAFGGRYVIAMMAIFSIYTGFIYNEFFSVPFAIFAPSAYACRDPSCRDASTTGLIKVRNTYPFGLDPVWHGSRSELPFLNSLKMKMSILLGVCQMNLGIILSYFNAKYFGSSIDVWHQFVPQMIFLNSLFGYLSLIIIVKWFTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQLGLLLSALVAVPWMLLPKPFLLKKQHEERHQGQSYSLVHSTDDPIESGPHSPHGHEGFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLMAWEFNNTVILIVGVIVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYVGDGYKFAPFSFALLSDEDEL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2195 817 Coils Coil 99 126 - -
Amo17g2195 817 PIRSF ATP6V0A1 8 817 IPR026028 GO:0000220|GO:0046961
Amo17g2195 817 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 816 - -
Amo17g2195 817 Pfam V-type ATPase 116kDa subunit family 36 808 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo17g2195 817 PANTHER VACUOLAR PROTON ATPASES 4 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2195 Amo-Chr17 112783844 112790807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2195 10 816 Primary Pumps ATPases(2) AT4G39080 74.784 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2195 K02154 - gmx:100805813 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2195 17 112783844 112790807 Amo17g2195 17 112783844 112790807 ECH