Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2191 ATGATGAATGAAGGATGCCTTCCCACGATGGATCTGCTACGATCGGAGCCTATGCAGCTAGTTCAGTTGATCATTCCCATCGAAGCAGCTCATCGATCCATCTCTTACCTCGGTGATCTCGGYCTCGTTCAATTCAAAGATCTAAATGCAGATAAAAGCCCGTTCCAACGGACATATGCTACTCAGATTAAAAGGTGCGGGGAAATGGCTCGCACGCTACGGTTATTTAAGGAACAAATGACAAAGGCGGGTGTATCTCCCTCGATGCAGAATACCAGAAATAGTGTTATTGATCTGGATCATTTGGAGGTTAAACTTAAAGAACTTGAAGCTGATCTGCTTGAGAAYAAGGCAAATAATGAGAAGTTGCAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGGTTGGTGAATTTTTCTCTTYAGCACAAAACAKTGCTGTAGCTCAGCAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGCGTTTTCGGCTAAGCAGGTTAAGCTGGGTTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATTCCTTTTGAAAGAATCTTGTTTCGTGCTACAAGGGGGAATGTATTTATGAAGCAAGCCGTGATTGATAAACCTGTGCTCGATCCAATATCAGGAGAGAAGGTTGATAAAAATGTATTTGTTGTATTTTATTCTGGGGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGCTATCCTTTCTCAGATGACCTGGGGAAACAATTTCAGATGATAAGAGAGGTGTCAGGGAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAACACTTTACTCCAGTCTATYGGACATCAGTATGAGCAGTGGAGCCTTCTGTTGAGGAGGGAAAAAGCCGTTTATCACACCCTAAATATGCTTAGCTTTAATGTGACGAGAAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGATTCAGAAAGTATTGCAGCGGGCAACTAGGGATTGTAACTCCCAGGTTGGAGCCATATTTCAGGTTCTCCAGACAAAGGAATCACCGCCGACYTATTTTTACACAAACAAATTTACTTCTTCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCAGGAGGCAAATCCMGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTGTCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACCTCATAATYAGAGAGAAAAAGTATTCRAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGGACGCTATGTYATTGCGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTGTTCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGAAACACCTACCCATTTGGTCTGGATCCTGTATGGCATGGCAWTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAGATGAAGATGTCTATTTTACTAGGAGTATGCCAGATGAATCTTGGAATCATATTGAGTTATTTTAATGCAAAATACTTTGGAAGCAGCATAGATGTTTGGCACCAATTTGTTCCCCAGATGATATTCTTAAATAGYCTATTCGGCTACCTTTCGCTCATCATAATTGTTAAATGGTTTACTGGATCACAGGCTGACTTATATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAGAAGTTTCTTCAACTTGGATTATTRTTGTCAGCACTTGTAGCTGTACCATGGATGTTATTACCAAAGCCCTTTCTTCTGAAGAAACAACACGAAGAAAGGCATCAAGGTCAATCTTACTCTCTGWTCCACAGTACGGATGATCCTATTGAATCAGGGCCACATAGCCCTCACGGCCATGAGGRGTTTGAGTTCAGTGAAGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGTGCTGTGTCTAATACAGCTTCATATCTACGTCTATGGGCCCTCAGTCTGGCTCATTCAGAGTTGTCGAGTGTCTTCTATGACAAAGTTCTACTTATGGCCTGGGAGTTTAATAATACCGTTATTCTTATTGTTGGCGTTATTGTTTTCATATGTGCAACTGTTGGTGTATTACTGCTTATGGAAACTCTAAGCGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTTCAGAATAAATTTTATGTGGGAGATGGTTACAAGTTTGCCCCATTTTCATTTGCGTTACTTAKTGATGAGGATGAACTGTAG 2454 0.4075 MMNEGCLPTMDLLRSEPMQLVQLIIPIEAAHRSISYLGDLGLVQFKDLNADKSPFQRTYATQIKRCGEMARTLRLFKEQMTKAGVSPSMQNTRNSVIDLDHLEVKLKELEADLLENKANNEKLQHTYNELVEYKLVLEKVGEFFSXAQNXAVAQQREHDVQTTVKGSIDSPLLLEQETTAFSAKQVKLGFISGLVPREKSIPFERILFRATRGNVFMKQAVIDKPVLDPISGEKVDKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIREVSGKLSELKTTIDVGLLHWNTLLQSIGHQYEQWSLLLRREKAVYHTLNMLSFNVTRKCLLAEGWCPVFATSQIQKVLQRATRDCNSQVGAIFQVLQTKESPPTYFYTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICILLASLYLIIREKKYSSQKLGDIMQMAFGGRYVIAMMAIFSIYTGFIYNEFFSVPFAIFAPSAYACRDPSCRDASTTGLIKVRNTYPFGLDPVWHGXRSELPFLNSLKMKMSILLGVCQMNLGIILSYFNAKYFGSSIDVWHQFVPQMIFLNSLFGYLSLIIIVKWFTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQLGLLLSALVAVPWMLLPKPFLLKKQHEERHQGQSYSLXHSTDDPIESGPHSPHGHEXFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLMAWEFNNTVILIVGVIVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYVGDGYKFAPFSFALLXDEDEL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2191 817 PIRSF ATP6V0A1 8 817 IPR026028 GO:0000220|GO:0046961
Amo17g2191 817 Pfam V-type ATPase 116kDa subunit family 36 808 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo17g2191 817 Coils Coil 99 126 - -
Amo17g2191 817 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 816 - -
Amo17g2191 817 PANTHER VACUOLAR PROTON ATPASES 4 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo17g2191 817 MobiDBLite consensus disorder prediction 670 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2191 Amo-Chr17 112686993 112693985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2191 10 816 Primary Pumps ATPases(2) AT4G39080 74.660 0.0 1255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2191 K02154 - gmx:100805813 1362.82