Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2177 ATGCGTGGATTACACAAATCGAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGATTAGGTTATTCTTATCAGAGGAATCTCCTTCTCAAGTTGGTTTAAATTCTCAAGATCACCTCCAAGCAAAGACATCATTGCTATTACCTCCAGGAGGAACAAGTTCTGATGACTTTCTACCTCCTGGATTCGAGGGAACCCAAGCGTCGACCCATTTTGAGGTTGATCTGTCTCAAATACCAGTGTCTAGGTGGACTACACCATGCAAGATTATACTTAATTTAGCGTGGCAAGTGGTGGCTGGGGAAGAAAGCAAGGAGGTAGAAGATCAATGTCAGAGGGAGATGAGAGTACTTGAAGCAATTTATCCCCGCCCATCATCCATTCCTCCAAACCCATCTGTTTCAGCGGATGTCGAGGCTTCCCAGTGCATTGATAGCCAAACTACCTTGATACCAATTACACCTATGGAAGATGAAGATGCTACAACTGATTCTATCTCACAATCTAATTCTTTTGAATTACCTCCTGTCATACCAAATGGTCCAAACCCCCACACAAGTGTGCAGTTAGCTCATGGCTCATTATCTGATGCATTAACTAGTGTGATGAAGAATAATGAACATGGGAATTTGATTGATCCTGAATTATTCAATAATATTCTCAAAAACCCAGAAGTGATTGAGAAACTGGTTAGAGATTATGGAGCCTCTAACAGTTTGCAGAGTGCAAATAATCCGGGGTCATCTTCAGTGACATTTTCACATCCATCTCTTTCTAGTCATCAAGTAGAAGCCAGTGCACCAACATCAGTTACATTTTCGTCTCCTAACTATCCTTCTTCAGGTGGAAATCAAGTAGGACCTGTTTCTACCCAATGGCTTCCTAGGCCTCCGATGAGTCAAGCTACAATTTCTTCTGCCTCAGACGTCTCTCTACCAAAGGATGTAAATTATTACAAGAGCTTAATTCAACAACATGGAGAAGAGAGACAAGAAACACACCCTTACACTGCTAACCGTCAAATCCAGAGACCAATGGTGAACCATGAGACACCACAACACAATTCTAGATCAAGGGAAACTAAATCGAAGATAATGAAACCTTGTATATTCTTTAACAGTTCTAGAGGATGTCGAAATGGTGCTAATTGTGCATACCAACATGATGTAACATTCCAATCACGAGGTAGTGCCGTGCCTTCGGTACAAAGTTCAAAGAGAATGAAAATGGATAGTGAGATCAGCAGTTAG 1254 0.4139 MRGLHKSKRVSWASDLDLCQIRLFLSEESPSQVGLNSQDHLQAKTSLLLPPGGTSSDDFLPPGFEGTQASTHFEVDLSQIPVSRWTTPCKIILNLAWQVVAGEESKEVEDQCQREMRVLEAIYPRPSSIPPNPSVSADVEASQCIDSQTTLIPITPMEDEDATTDSISQSNSFELPPVIPNGPNPHTSVQLAHGSLSDALTSVMKNNEHGNLIDPELFNNILKNPEVIEKLVRDYGASNSLQSANNPGSSSVTFSHPSLSSHQVEASAPTSVTFSSPNYPSSGGNQVGPVSTQWLPRPPMSQATISSASDVSLPKDVNYYKSLIQQHGEERQETHPYTANRQIQRPMVNHETPQHNSRSRETKSKIMKPCIFFNSSRGCRNGANCAYQHDVTFQSRGSAVPSVQSSKRMKMDSEISS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2177 417 MobiDBLite consensus disorder prediction 241 262 - -
Amo17g2177 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 412 - -
Amo17g2177 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 412 - -
Amo17g2177 417 MobiDBLite consensus disorder prediction 396 417 - -
Amo17g2177 417 ProSiteProfiles Zinc finger C3H1-type profile. 364 392 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2177 Amo-Chr17 111674371 111677992 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo17g2177 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2177 - - adu:107460053 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2177 17 111674371 111677992 Amo17g2177 17 111674371 111677992 ECH