Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2139 ATGCTCTCAATTCTTGATGGTACTCAACTTGCTGGATTTGATTCCGATACTATCATCAAAGCCACCACTTGGATTCTGATGGGAGGATCGATTGACACCACTTCAGGAACTCTTATATGGATATTATCTTGTATGTTGAACAATACAGGCACAATAGAACAAGCACAAAAGGAGTTGAACATCTATGTTGGTAAAGACAGACTTGTAAACGAAACCGACATAAGTAAGTTGGTGTACATTCAAGCCATCGTTAAAGAGACATTAAGGCTACACCCTACAGCAATTTTCTCAGGACCTCGTGAGTTTGCGGATGATTGCTTTGTTAATGGCTACCACATTCCAAAAGGAACGCAACTAATCATAAATTTATGGAAGATTCACACGGATCCTAGCATTCGGTCAGACCCATTGGAATTTAAGCCAGAGAGGTTCCTTACCACTCACAAAGATGTTGATGTCAGAGGTAACCACTTTGAGTTGATCCCATTTGGAAGTGGAATAAGAATGTGTCCCGGACTATCATTTGCCCTTCCCATGATTCATCTAACTTTGGCTACTTTCTTGCAATCCTTTGAAATTTCAAAGCCATCTGATGAACCCATTGATATGACTGAAATATTTGGCCTCACAACTATGAAAGCTACTCCCCTTGATGTTCTCATCAAGCCACGTCTTTCTTCTAGGCTCTACGGTTTATCTTGA 702 0.4046 MLSILDGTQLAGFDSDTIIKATTWILMGGSIDTTSGTLIWILSCMLNNTGTIEQAQKELNIYVGKDRLVNETDISKLVYIQAIVKETLRLHPTAIFSGPREFADDCFVNGYHIPKGTQLIINLWKIHTDPSIRSDPLEFKPERFLTTHKDVDVRGNHFELIPFGSGIRMCPGLSFALPMIHLTLATFLQSFEISKPSDEPIDMTEIFGLTTMKATPLDVLIKPRLSSRLYGLS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2139 233 Pfam Cytochrome P450 15 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS P450 superfamily signature 161 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS P450 superfamily signature 170 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 163 172 IPR017972 GO:0005506|GO:0016705
Amo17g2139 233 SUPERFAMILY Cytochrome P450 13 224 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 Gene3D Cytochrome P450 5 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PANTHER CYTOCHROME P450 82C3-RELATED 1 230 - -
Amo17g2139 233 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS E-class P450 group I signature 160 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PRINTS E-class P450 group I signature 170 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2139 233 PANTHER CYTOCHROME P450 82A2 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2139 Amo-Chr17 110765520 110766449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2139 1 230 Cytochrome P450 AT4G31950 51.502 3.47e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2139 - - aip:107609972 470.7