Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2111 ATGGCTGTTTTTGTGAACAATAATAGTAATAATAATAATGGCTTAATGGTCCGTTTGAGTTTGATAGTATTGTTAGCTTTGTGGCAGACGACGAGTGCGTTGGTGAAACTGCCACCAAATGTTACAGTTCCTGCGGTGATAGCTTTTGGAGATTCAATAGTAGACCCTGGCAACAACAACGGCATTAAGACACTCGTCAAATGCAATTTCCCTCCGTACGGAAAGGATTTTCAGGGAGGCAACCCAACTGGTCGTTTTTGCAATGGAAAAATTCCTACCGACCTTCTTGTTGAAGAAATGAATATTAAGCAAACTTTGCCCGCATATTTGGATCCAAATCTACAACCAAGTGACCTTGTTACGGGAGTGTGCTTTGCTTCAGGTGCCTCTGGATACGATCCCTTGACGCCAAAAATAGCGTCAGTGATATCACTGTCGGAGCAACTAGAGATGTTCAAAGAGTACATAGGGAAGCTTAAACAGATAGTTGGAGAAGAAAGAACAAATGTCATCCTACAAAACAGTCTTTACCTTGTAGTGGCAGGAAGTGACGATATTGCCAATACCTATTTCGTTGCTCGCGTTAGACAACTCCAGTATGATATTCCTGCTTACACTGACCTTATGGTCAATTCAGCCTCTAATTTCGTTAAGGAGATATATGCTCTTGGAGCACGGAGAATTGGGGTACTGAGTGCACCACCAATTGGGTGTGTGCCTTCACAGAGAACTTTAGCTGGAGGCTTAGCAAGAGAGTGTGCTGAAGATTACAATTACGCGGCAAAATTATTTAACTCCAAACTGTCAAAAGAATTGGATTCTCTTAATCGCAACTCACCCAATAGTAGGATCGTTTACATTGATGTTTACAACCCCCTTCTTGATATCATTCTCAACTACCAAAATTATGGTTATAAAGTTGTGGACAGAGGTTGCTGTGGAACAGGGAAATTAGAGGTTGCAGTGTTGTGCAACCCTTTGGATGCCACTTGTCCAGATGCTTCAGAATATGTTTTTTGGGATAGTTATCATCCAACTGAATCAGTGTACAGACTCCTAATACGACAAGTTCTTGATAAGTACATCGAAAAATTGATATAA 1101 0.4105 MAVFVNNNSNNNNGLMVRLSLIVLLALWQTTSALVKLPPNVTVPAVIAFGDSIVDPGNNNGIKTLVKCNFPPYGKDFQGGNPTGRFCNGKIPTDLLVEEMNIKQTLPAYLDPNLQPSDLVTGVCFASGASGYDPLTPKIASVISLSEQLEMFKEYIGKLKQIVGEERTNVILQNSLYLVVAGSDDIANTYFVARVRQLQYDIPAYTDLMVNSASNFVKEIYALGARRIGVLSAPPIGCVPSQRTLAGGLARECAEDYNYAAKLFNSKLSKELDSLNRNSPNSRIVYIDVYNPLLDIILNYQNYGYKVVDRGCCGTGKLEVAVLCNPLDATCPDASEYVFWDSYHPTESVYRLLIRQVLDKYIEKLI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2111 366 CDD SGNH_plant_lipase_like 44 361 IPR035669 -
Amo17g2111 366 Pfam GDSL-like Lipase/Acylhydrolase 46 354 IPR001087 GO:0016788
Amo17g2111 366 SUPERFAMILY SGNH hydrolase 168 364 - -
Amo17g2111 366 PANTHER GDSL ESTERASE/LIPASE EXL3 16 364 - -
Amo17g2111 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 364 - -
Amo17g2111 366 Gene3D SGNH hydrolase 37 363 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2111 Amo-Chr17 109612427 109616029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2111 40 359 Pollen Coat Proteome AT1G75910 38.700 1.10e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2111 - - gmx:100793078 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2111 17 109612427 109616029 Amo17g2111 17 109612427 109616029 ECH